RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 NAV1Q8NEY1 1877 aa10.63□□□□□ -0.71
LINC00342-202ENST00000448494 WDR64B1ANS9 1081 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 SMIM22K7EJ46 135 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 NRP2O60462 931 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 EIF1BO60739 113 aaKnown RBP10.62□□□□□ -0.71
LINC00342-202ENST00000448494 PDE9AO76083 593 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 RAF1P04049 648 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 GLAP06280 429 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 MYL3P08590 195 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 KCNA5P22460 613 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 PSMB9P28065 219 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 EIF1P41567 113 aaKnown RBP10.62□□□□□ -0.71
LINC00342-202ENST00000448494 BRCC3P46736 316 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 CTU2Q2VPK5 515 aaKnown RBP10.62□□□□□ -0.71
LINC00342-202ENST00000448494 LIN9Q5TKA1 542 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 SHQ1Q6PI26 577 aaKnown RBP10.62□□□□□ -0.71
LINC00342-202ENST00000448494 CYS1Q717R9 158 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 ENOSF1Q7L5Y1 443 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 SNX20Q7Z614 316 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 KRT73Q86Y46 540 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 SPPL2CQ8IUH8 684 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 ATG16L2Q8NAA4 619 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 ANKRD52Q8NB46 1076 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 KBTBD8Q8NFY9 601 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 ROPN1LQ96C74 230 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 TUBGCP3Q96CW5 907 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 TOX2Q96NM4 488 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 ZNF251Q9BRH9 671 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 NAT9Q9BTE0 207 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 PLA2G12BQ9BX93 195 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 ELOVL6Q9H5J4 265 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 PRDM9Q9NQV7 894 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 CUEDC1Q9NWM3 386 aaPredicted RBP10.62□□□□□ -0.71
LINC00342-202ENST00000448494 C14orf119Q9NWQ9 140 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 USE1Q9NZ43 259 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 NYAP2Q9P242 653 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 SEPT9Q9UHD8 586 aaPredicted RBP10.62□□□□□ -0.71
LINC00342-202ENST00000448494 EDARQ9UNE0 448 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 PLCL2Q9UPR0 1127 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 MAGEB6P1A0A0J9YX57 407 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 WRBO00258 174 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 MRASO14807 208 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 PMM2O15305 246 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 GRID2O43424 1007 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 ALPLP05186 524 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 HBQ1P09105 142 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 CD36P16671 472 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 CD53P19397 219 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 CHRM3P20309 590 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 TGFBR2P37173 567 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 CDKN2BP42772 138 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 GSTM5P46439 218 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 CLCNKAP51800 687 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 SLC7A2P52569 658 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 ARFIP1P53367 373 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 CD47Q08722 323 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 ASAH1Q13510 395 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 ZIK1Q3SY52 487 aaPredicted RBP10.62□□□□□ -0.71
LINC00342-202ENST00000448494 TMEM198Q66K66 360 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 LAIR2Q6ISS4 152 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 PADI6Q6TGC4 694 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 SCARA5Q6ZMJ2 495 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 TMC8Q8IU68 726 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 NAT16Q8N8M0 369 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 UBASH3BQ8TF42 649 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 HAS1Q92839 578 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 EXOC2Q96KP1 924 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 TRNT1Q96Q11 434 aaKnown RBP10.62□□□□□ -0.71
LINC00342-202ENST00000448494 SLC30A2Q9BRI3 323 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 CDCA7Q9BWT1 371 aaPredicted RBP10.62□□□□□ -0.71
LINC00342-202ENST00000448494 ESRP2Q9H6T0 727 aaKnown RBP10.62□□□□□ -0.71
LINC00342-202ENST00000448494 CATSPERZQ9NTU4 200 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 PIH1D1Q9NWS0 290 aaKnown RBP10.62□□□□□ -0.71
LINC00342-202ENST00000448494 FAM118AQ9NWS6 357 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 ACTR10Q9NZ32 417 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 CTSFQ9UBX1 484 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 MALT1Q9UDY8 824 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 ASB4Q9Y574 426 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 PCDHGA9Q9Y5G4 932 aaKnown RBP10.62□□□□□ -0.71
LINC00342-202ENST00000448494 NUP188Q5SRE5 1749 aa10.62□□□□□ -0.71
LINC00342-202ENST00000448494 ARAP2Q8WZ64 1704 aa10.61□□□□□ -0.71
LINC00342-202ENST00000448494 TMEM82A0PJX8 343 aa10.61□□□□□ -0.71
LINC00342-202ENST00000448494 B4DXG7 233 aa10.61□□□□□ -0.71
LINC00342-202ENST00000448494 PTGES3LE9PB15 166 aa10.61□□□□□ -0.71
LINC00342-202ENST00000448494 TPP1O14773 563 aa10.61□□□□□ -0.71
LINC00342-202ENST00000448494 ZBTB24O43167 697 aaPredicted RBP10.61□□□□□ -0.71
LINC00342-202ENST00000448494 TRIM13O60858 407 aa10.61□□□□□ -0.71
LINC00342-202ENST00000448494 TSC22D2O75157 780 aa10.61□□□□□ -0.71
LINC00342-202ENST00000448494 RGS20O76081 388 aa10.61□□□□□ -0.71
LINC00342-202ENST00000448494 PDE8BO95263 885 aa10.61□□□□□ -0.71
LINC00342-202ENST00000448494 HTR3BO95264 441 aa10.61□□□□□ -0.71
LINC00342-202ENST00000448494 PAPSS2O95340 614 aaPredicted RBP10.61□□□□□ -0.71
LINC00342-202ENST00000448494 ALDOAP04075 364 aaKnown RBP10.61□□□□□ -0.71
LINC00342-202ENST00000448494 RPS3P23396 243 aaKnown RBP eCLIP10.61□□□□□ -0.71
LINC00342-202ENST00000448494 PIK3CBP42338 1070 aa10.61□□□□□ -0.71
LINC00342-202ENST00000448494 SP2Q02086 613 aa10.61□□□□□ -0.71
LINC00342-202ENST00000448494 EN1Q05925 392 aaPredicted RBP10.61□□□□□ -0.71
LINC00342-202ENST00000448494 PRKAA1Q13131 559 aa10.61□□□□□ -0.71
LINC00342-202ENST00000448494 IL18R1Q13478 541 aa10.61□□□□□ -0.71
LINC00342-202ENST00000448494 MAMLD1Q13495 774 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms