RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 A0A1W2PQM1 296 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 SDR42E2A6NKP2 422 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 EFCAB8A8MWE9 144 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 CD3EAPO15446 510 aaKnown RBP11.7□□□□□ -0.54
RFC4-208ENST00000447345 RAD51CO43502 376 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 OR1I1O60431 355 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 CSO75390 466 aaKnown RBP11.7□□□□□ -0.54
RFC4-208ENST00000447345 VAPBO95292 243 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 POLBP06746 335 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 F7P08709 466 aaPredicted RBP11.7□□□□□ -0.54
RFC4-208ENST00000447345 SLC2A4P14672 509 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 BRAFP15056 766 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 ITGB6P18564 788 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 ARNTP27540 789 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 CLCNKAP51800 687 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 ITGA8P53708 1063 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 CKAP4Q07065 602 aaKnown RBP11.7□□□□□ -0.54
RFC4-208ENST00000447345 DHX9Q08211 1270 aaKnown RBP11.7□□□□□ -0.54
RFC4-208ENST00000447345 ITIH4Q14624 930 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 HP1BP3Q5SSJ5 553 aaPredicted RBP11.7□□□□□ -0.54
RFC4-208ENST00000447345 DUS1LQ6P1R4 473 aaKnown RBP11.7□□□□□ -0.54
RFC4-208ENST00000447345 IYDQ6PHW0 289 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 RBM44Q6ZP01 1051 aaKnown RBP11.7□□□□□ -0.54
RFC4-208ENST00000447345 PCGF5Q86SE9 256 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 HOOK3Q86VS8 718 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 LILRA3Q8N6C8 439 aaPredicted RBP11.7□□□□□ -0.54
RFC4-208ENST00000447345 HEXDCQ8WVB3 486 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 PEX13Q92968 403 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 SNF8Q96H20 258 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 PWWP2AQ96N64 755 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 DEPDC7Q96QD5 511 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 GFM1Q96RP9 751 aaKnown RBP11.7□□□□□ -0.54
RFC4-208ENST00000447345 SLC38A3Q99624 504 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 FOXP3Q9BZS1 431 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 WWP1Q9H0M0 922 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 DPH5Q9H2P9 285 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 LRRN3Q9H3W5 708 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 IMP3Q9NV31 184 aaKnown RBP11.7□□□□□ -0.54
RFC4-208ENST00000447345 KCNK4Q9NYG8 393 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 SNX24Q9Y343 169 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 MSRB2Q9Y3D2 182 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 PCDHB1Q9Y5F3 818 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 RPS6KL1Q9Y6S9 549 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 ADAMTS20P59510 1910 aa11.7□□□□□ -0.54
RFC4-208ENST00000447345 MAP1BP46821 2468 aaKnown RBP11.69□□□□□ -0.54
RFC4-208ENST00000447345 KIR2DS5A0A0G2JLQ3 304 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 A0A0G2JNG1 304 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 MGAT4DA6NG13 374 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 PRR19A6NJB7 356 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 C1QTNF9BB2RNN3 333 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 D6RAR5 112 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 KIR2DS3K7RE56 304 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 SEC31AO94979 1220 aaKnown RBP11.69□□□□□ -0.54
RFC4-208ENST00000447345 C1QTNF9P0C862 333 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 PAMP19021 973 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 IVDP26440 423 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 HALP42357 657 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 NSG1P42857 185 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 MAGEA3P43357 314 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 RPL21P46778 160 aaKnown RBP11.69□□□□□ -0.54
RFC4-208ENST00000447345 FASLGP48023 281 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 DMPKQ09013 629 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 BOP1Q14137 746 aaKnown RBP11.69□□□□□ -0.54
RFC4-208ENST00000447345 KIR2DS5Q14953 304 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 CLCA4Q14CN2 919 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 BRD3Q15059 726 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 BBS9Q3SYG4 887 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 MSS51Q4VC12 460 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 AARS2Q5JTZ9 985 aaKnown RBP11.69□□□□□ -0.54
RFC4-208ENST00000447345 LYPLAL1Q5VWZ2 237 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 CDCP2Q5VXM1 449 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 NKAIN2Q5VXU1 208 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 KIAA0930Q6ICG6 404 aaPredicted RBP11.69□□□□□ -0.54
RFC4-208ENST00000447345 NAPRTQ6XQN6 538 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 CCNI2Q6ZMN8 369 aaPredicted RBP11.69□□□□□ -0.54
RFC4-208ENST00000447345 ZNF438Q7Z4V0 828 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 B3GNT8Q7Z7M8 397 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 SLC9B2Q86UD5 537 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 CFAP206Q8IYR0 622 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 DCBLD1Q8N8Z6 715 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 GPR150Q8NGU9 434 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 OR2L2Q8NH16 312 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 JPH3Q8WXH2 748 aaPredicted RBP11.69□□□□□ -0.54
RFC4-208ENST00000447345 CXorf40BQ96DE9 158 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 STAMBPL1Q96FJ0 436 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 FCRL3Q96P31 734 aaPredicted RBP11.69□□□□□ -0.54
RFC4-208ENST00000447345 TTC1Q99614 292 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 VPS37BQ9H9H4 285 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 RDH14Q9HBH5 336 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 ZNF624Q9P2J8 865 aaPredicted RBP11.69□□□□□ -0.54
RFC4-208ENST00000447345 CPNE7Q9UBL6 633 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 CDC23Q9UJX2 597 aa11.69□□□□□ -0.54
RFC4-208ENST00000447345 CFAP20Q9Y6A4 193 aaKnown RBP11.69□□□□□ -0.54
RFC4-208ENST00000447345 ACACBO00763 2458 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 FAM237BA0A1B0GVD1 139 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 UBA6A0AVT1 1052 aaPredicted RBP11.68□□□□□ -0.54
RFC4-208ENST00000447345 OR5K4A6NMS3 321 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 B4GAT1O43505 415 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 VIPP01282 170 aa11.68□□□□□ -0.54
RFC4-208ENST00000447345 SLC35G4P0C7Q5 338 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms