RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 UGT1A4P22310 534 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 CASRP41180 1078 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 HADHBP55084 474 aaKnown RBP20.34■□□□□ 0.85
CPNE1-219ENST00000440240 MPP3Q13368 585 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 ITGA9Q13797 1035 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 SLC1A5Q15758 541 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 CHRNA6Q15825 494 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 SKOR2Q2VWA4 1001 aaPredicted RBP20.34■□□□□ 0.85
CPNE1-219ENST00000440240 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.34■□□□□ 0.85
CPNE1-219ENST00000440240 IRGCQ6NXR0 463 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 FAM92BQ6ZTR7 304 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 GLT6D1Q7Z4J2 308 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 ZC3H18Q86VM9 953 aaKnown RBP20.34■□□□□ 0.85
CPNE1-219ENST00000440240 PPP1R3BQ86XI6 285 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 RCOR2Q8IZ40 523 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 ZNF567Q8N184 647 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 RASGEF1AQ8N9B8 481 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 GALNT6Q8NCL4 622 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 UBXN4Q92575 508 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 ZNF514Q96K75 400 aaPredicted RBP20.34■□□□□ 0.85
CPNE1-219ENST00000440240 MRGPRX2Q96LB1 330 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 UGT1A7Q9HAW7 530 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 UGT1A10Q9HAW8 530 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 UGT1A8Q9HAW9 530 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 PDE7BQ9NP56 450 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 CROTQ9UKG9 612 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 TRHDEQ9UKU6 1024 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 PADI1Q9ULC6 663 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 PTPN13Q12923 2485 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 HACD1B0YJ81 288 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 SPAG6O75602 509 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 KIAA0754O94854 1291 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 FECHP22830 423 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 F8A1P23610 371 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 CHRNA4P43681 627 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 NOMO1Q15155 1222 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 LLGL1Q15334 1064 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 RPE65Q16518 533 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 SKIDA1Q1XH10 827 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 TMEM220Q6QAJ8 160 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 FAM151BQ6UXP7 276 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 BPHLQ86WA6 291 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-219ENST00000440240 DDHD1Q8NEL9 900 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 BLOC1S5Q8TDH9 187 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 OXNAD1Q96HP4 312 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-219ENST00000440240 ELMO2Q96JJ3 720 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 FCRL4Q96PJ5 515 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 SEMA5BQ9P283 1151 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 LNPEPQ9UIQ6 1025 aa20.33■□□□□ 0.85
CPNE1-219ENST00000440240 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.33■□□□□ 0.85
CPNE1-219ENST00000440240 MRPS18BQ9Y676 258 aaKnown RBP20.33■□□□□ 0.85
CPNE1-219ENST00000440240 AKR1B15C9JRZ8 316 aaPredicted RBP20.32■□□□□ 0.84
CPNE1-219ENST00000440240 RECKO95980 971 aa20.32■□□□□ 0.84
CPNE1-219ENST00000440240 ADCY2Q08462 1091 aa20.32■□□□□ 0.84
CPNE1-219ENST00000440240 LONRF2Q1L5Z9 754 aa20.32■□□□□ 0.84
CPNE1-219ENST00000440240 KATNAL2Q8IYT4 538 aa20.32■□□□□ 0.84
CPNE1-219ENST00000440240 BEND7Q8N7W2 519 aaPredicted RBP20.32■□□□□ 0.84
CPNE1-219ENST00000440240 IPMKQ8NFU5 416 aa20.32■□□□□ 0.84
CPNE1-219ENST00000440240 SLC41A2Q96JW4 573 aa20.32■□□□□ 0.84
CPNE1-219ENST00000440240 EPN3Q9H201 632 aa20.32■□□□□ 0.84
CPNE1-219ENST00000440240 KCNMB2Q9Y691 235 aa20.32■□□□□ 0.84
CPNE1-219ENST00000440240 hCG_1818297A0A087WSY0 165 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 KLHL33A6NCF5 533 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 STX7O15400 261 aaKnown RBP20.31■□□□□ 0.84
CPNE1-219ENST00000440240 KATNA1O75449 491 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 MAGEA1P43355 309 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 CTSCP53634 463 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 ERV3-1Q14264 604 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 LACTB2Q53H82 288 aaPredicted RBP20.31■□□□□ 0.84
CPNE1-219ENST00000440240 GPRC6AQ5T6X5 926 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 ATP1A1-AS1Q5TC04 95 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 METRNLQ641Q3 311 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 SIDT2Q8NBJ9 832 aaKnown RBP20.31■□□□□ 0.84
CPNE1-219ENST00000440240 ZNF398Q8TD17 642 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 ZFPM2Q8WW38 1151 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 FERMT1Q9BQL6 677 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 FSD1LQ9BXM9 530 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 SMOXQ9NWM0 555 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 RARRES3Q9UL19 164 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 PSMD13Q9UNM6 376 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 POLHQ9Y253 713 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 PCDHGA6Q9Y5G7 932 aa20.31■□□□□ 0.84
CPNE1-219ENST00000440240 IGHV5-51A0A0C4DH38 117 aa20.3■□□□□ 0.84
CPNE1-219ENST00000440240 OR2AG2A6NM03 316 aa20.3■□□□□ 0.84
CPNE1-219ENST00000440240 MKRN2OSH3BPM6 223 aa20.3■□□□□ 0.84
CPNE1-219ENST00000440240 BUD23O43709 281 aaKnown RBP20.3■□□□□ 0.84
CPNE1-219ENST00000440240 ANXA9O76027 345 aa20.3■□□□□ 0.84
CPNE1-219ENST00000440240 MSH3P20585 1137 aa20.3■□□□□ 0.84
CPNE1-219ENST00000440240 ACY1Q03154 408 aa20.3■□□□□ 0.84
CPNE1-219ENST00000440240 XRCC4Q13426 336 aa20.3■□□□□ 0.84
CPNE1-219ENST00000440240 PLCL1Q15111 1095 aa20.3■□□□□ 0.84
CPNE1-219ENST00000440240 KMT5CQ86Y97 462 aa20.3■□□□□ 0.84
CPNE1-219ENST00000440240 CCDC50Q8IVM0 306 aa20.3■□□□□ 0.84
CPNE1-219ENST00000440240 RBM41Q96IZ5 413 aaKnown RBP20.3■□□□□ 0.84
CPNE1-219ENST00000440240 QKIQ96PU8 341 aaKnown RBP eCLIP20.3■□□□□ 0.846e-7■■■□□ 15.2
CPNE1-219ENST00000440240 CD180Q99467 661 aa20.3■□□□□ 0.84
CPNE1-219ENST00000440240 RSPH14Q9UHP6 348 aa20.3■□□□□ 0.84
CPNE1-219ENST00000440240 ACSL5Q9ULC5 683 aa20.3■□□□□ 0.84
CPNE1-219ENST00000440240 COL12A1Q99715 3063 aa20.29■□□□□ 0.84
CPNE1-219ENST00000440240 C2orf81A6NN90 581 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms