RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PSAPP07602 524 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 TGFB3P10600 412 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 CD19P15391 556 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 HOXB8P17481 243 aaPredicted RBP5.09□□□□□ -1.6
RIF1-203ENST00000428287 ITGB7P26010 798 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 HCAR3P49019 387 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 IGBP1P78318 339 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 PRKCEQ02156 737 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 LAIR1Q6GTX8 287 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 LRRC8EQ6NSJ5 796 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 DET1Q7L5Y6 550 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 CEP97Q8IW35 865 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 SLC38A6Q8IZM9 456 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 NXNL1Q96CM4 212 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 AIFM2Q9BRQ8 373 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 ADPGKQ9BRR6 497 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 CCDC32Q9BV29 185 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 TUBB1Q9H4B7 451 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 CCDC177Q9NQR7 707 aaPredicted RBP5.09□□□□□ -1.6
RIF1-203ENST00000428287 CNGB3Q9NQW8 809 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 EIF3KQ9UBQ5 218 aaKnown RBP5.09□□□□□ -1.6
RIF1-203ENST00000428287 WARS2Q9UGM6 360 aaKnown RBP5.09□□□□□ -1.6
RIF1-203ENST00000428287 NUP50Q9UKX7 468 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 AGO1Q9UL18 857 aaKnown RBP5.09□□□□□ -1.6
RIF1-203ENST00000428287 SCAF8Q9UPN6 1271 aaKnown RBP5.09□□□□□ -1.6
RIF1-203ENST00000428287 GPSM3Q9Y4H4 160 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 TOR1BO14657 336 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 AOC2O75106 756 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 ODC1P11926 461 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 STMN1P16949 149 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 TAL1P17542 331 aaPredicted RBP5.09□□□□□ -1.6
RIF1-203ENST00000428287 ICAM3P32942 547 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 ZFP69Q49AA0 526 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 C5orf22Q49AR2 442 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 FBXO43Q4G163 708 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 AGAP9Q5VTM2 703 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 CNSTQ6PJW8 725 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 TMC5Q6UXY8 1006 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 GDPGP1Q6ZNW5 385 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 STK32CQ86UX6 486 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 FAM35AQ86V20 835 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 PROSER1Q86XN7 944 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 SUN5Q8TC36 379 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 RNF139Q8WU17 664 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 NFKBIZQ9BYH8 718 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 FBRSL1Q9HCM7 1045 aaKnown RBP5.09□□□□□ -1.6
RIF1-203ENST00000428287 MAGEL2Q9UJ55 1249 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 TSPAN16Q9UKR8 245 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 MAGED2Q9UNF1 606 aaPredicted RBP5.09□□□□□ -1.6
RIF1-203ENST00000428287 DGKBQ9Y6T7 804 aa5.09□□□□□ -1.6
RIF1-203ENST00000428287 OR5K4A6NMS3 321 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 EFCAB9A8MZ26 197 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 I6L893 689 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 NDUFA2O43678 99 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ZBTB7AO95365 584 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 IKQ13123 557 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 TWF2Q6IBS0 349 aaKnown RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 XKRXQ6PP77 449 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 SCARA5Q6ZMJ2 495 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 C2CD4AQ8NCU7 369 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 LRCH3Q96II8 777 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 PHOX2BQ99453 314 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 NT5C1AQ9BXI3 368 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ARHGAP39Q9C0H5 1083 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ELOVL4Q9GZR5 314 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 SYBUQ9NX95 663 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 B3GNT2Q9NY97 397 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 KLHL21Q9UJP4 597 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ZNF214Q9UL59 606 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 SLC39A10Q9ULF5 831 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.08□□□□□ -1.6
RIF1-203ENST00000428287 A0A075B6Q4 140 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 TRIM3O75382 744 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 SOAT2O75908 522 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 GAAP10253 952 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ZNF30P17039 623 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 YWHAQP27348 245 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 NR4A2P43354 598 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 FSCN1Q16658 493 aaKnown RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 FAM187BQ17R55 369 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 LDLRAP1Q5SW96 308 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ZNF438Q7Z4V0 828 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 CACTIN-AS1Q8N1I8 211 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 CYP4Z2PQ8N1L4 340 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 MIER2Q8N344 545 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.08□□□□□ -1.6
RIF1-203ENST00000428287 ZNF548Q8NEK5 533 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 OR52K1Q8NGK4 314 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 SH3KBP1Q96B97 665 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 DEPDC7Q96QD5 511 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 KCTD14Q9BQ13 255 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 WDR6Q9NNW5 1121 aaKnown RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 PCDH12Q9NPG4 1184 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 RIPK3Q9Y572 518 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ZNF99A8MXY4 864 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 hCG_2039718K7EN88 272 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 EEF2KO00418 725 aaKnown RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 PLK4O00444 970 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 MAN1A2O60476 641 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 MFN2O95140 757 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms