RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 POLHQ9Y253 713 aa17.07■□□□□ 0.32
DDR1-235ENST00000428153 HACD1B0YJ81 288 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 SPOPO43791 374 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 CST8O60676 142 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 MFAP3LO75121 409 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 KIAA0754O94854 1291 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 DRG2P55039 364 aaKnown RBP17.06■□□□□ 0.32
DDR1-235ENST00000428153 ACY1Q03154 408 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 MPP3Q13368 585 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 SLC1A5Q15758 541 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 SKIDA1Q1XH10 827 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 TFDP3Q5H9I0 405 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 SIRPB2Q5JXA9 342 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 TCTN3Q6NUS6 607 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 C16orf46Q6P387 395 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 VSTM4Q8IW00 320 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 BEND7Q8N7W2 519 aaPredicted RBP17.06■□□□□ 0.32
DDR1-235ENST00000428153 GALNT6Q8NCL4 622 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 P3H4Q92791 437 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 BPIFA1Q9NP55 256 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 SPTLC3Q9NUV7 552 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 UBP1Q9NZI7 540 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 WDR37Q9Y2I8 494 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 PKP3Q9Y446 797 aa17.06■□□□□ 0.32
DDR1-235ENST00000428153 USP9YO00507 2555 aaPredicted RBP17.05■□□□□ 0.32
DDR1-235ENST00000428153 GLYATL1P3A0A0U1RQE8 302 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 MKRN2OSH3BPM6 223 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 KIF1CO43896 1103 aaKnown RBP17.05■□□□□ 0.32
DDR1-235ENST00000428153 POP7O75817 140 aaKnown RBP17.05■□□□□ 0.32
DDR1-235ENST00000428153 PYGMP11217 842 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 NFKB1P19838 968 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 COMTP21964 271 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 KLRB1Q12918 225 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 COLEC12Q5KU26 742 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 IRGCQ6NXR0 463 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 GLT6D1Q7Z4J2 308 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 CNGA4Q8IV77 575 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 MRGPRX2Q96LB1 330 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 C19orf43Q9BQ61 176 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 LHX9Q9NQ69 397 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 ZNF71Q9NQZ8 489 aaPredicted RBP17.05■□□□□ 0.32
DDR1-235ENST00000428153 KLHL8Q9P2G9 620 aaPredicted RBP17.05■□□□□ 0.32
DDR1-235ENST00000428153 LNPEPQ9UIQ6 1025 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 TRHDEQ9UKU6 1024 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 RARRES3Q9UL19 164 aa17.05■□□□□ 0.32
DDR1-235ENST00000428153 RP1L1Q8IWN7 2480 aaPredicted RBP17.05■□□□□ 0.32
DDR1-235ENST00000428153 CREG1O75629 220 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 PECAM1P16284 738 aaPredicted RBP17.04■□□□□ 0.32
DDR1-235ENST00000428153 PMS2P54278 862 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 CHRNA6Q15825 494 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 RPE65Q16518 533 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 PPP2R5EQ16537 467 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 LONRF2Q1L5Z9 754 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 METRNLQ641Q3 311 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 SPOCD1Q6ZMY3 1216 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 FAM92BQ6ZTR7 304 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 PID1Q7Z2X4 250 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 APLFQ8IW19 511 aaPredicted RBP17.04■□□□□ 0.32
DDR1-235ENST00000428153 ZNF567Q8N184 647 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 RASGEF1AQ8N9B8 481 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 SIDT2Q8NBJ9 832 aaKnown RBP17.04■□□□□ 0.32
DDR1-235ENST00000428153 OR8K5Q8NH50 307 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 GPR87Q9BY21 358 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 SAE1Q9UBE0 346 aaPredicted RBP17.04■□□□□ 0.32
DDR1-235ENST00000428153 ACSL5Q9ULC5 683 aa17.04■□□□□ 0.32
DDR1-235ENST00000428153 MRPS18BQ9Y676 258 aaKnown RBP17.04■□□□□ 0.32
DDR1-235ENST00000428153 USP9XQ93008 2570 aaPredicted RBP17.04■□□□□ 0.32
DDR1-235ENST00000428153 IGHV5-51A0A0C4DH38 117 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 CLEC18AA5D8T8 446 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 TLCD2A6NGC4 264 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 RFPL1O75677 317 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 ZRANB2O95218 330 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDR1-235ENST00000428153 CTSCP53634 463 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 SRSF1Q07955 248 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDR1-235ENST00000428153 XRCC4Q13426 336 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 TUBB3Q13509 450 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 DNASE1L3Q13609 305 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 UBAP2LQ14157 1087 aaKnown RBP17.03■□□□□ 0.32
DDR1-235ENST00000428153 FAM182AQ5T1J6 154 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 GPRC6AQ5T6X5 926 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 ATP1A1-AS1Q5TC04 95 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 TMEM220Q6QAJ8 160 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 CLEC18BQ6UXF7 455 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 FAM151BQ6UXP7 276 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 KATNAL2Q8IYT4 538 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 CLEC18CQ8NCF0 446 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 OXNAD1Q96HP4 312 aaPredicted RBP17.03■□□□□ 0.32
DDR1-235ENST00000428153 QKIQ96PU8 341 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDR1-235ENST00000428153 ALG6Q9Y672 507 aa17.03■□□□□ 0.32
DDR1-235ENST00000428153 hCG_1818297A0A087WSY0 165 aa17.02■□□□□ 0.32
DDR1-235ENST00000428153 OR5K3A6NET4 321 aa17.02■□□□□ 0.32
DDR1-235ENST00000428153 MGAT4DA6NG13 374 aa17.02■□□□□ 0.32
DDR1-235ENST00000428153 GAPDHSO14556 408 aaPredicted RBP17.02■□□□□ 0.32
DDR1-235ENST00000428153 UGT1A9O60656 530 aa17.02■□□□□ 0.32
DDR1-235ENST00000428153 MTHFD1P11586 935 aaKnown RBP17.02■□□□□ 0.32
DDR1-235ENST00000428153 UGT1A6P19224 532 aa17.02■□□□□ 0.32
DDR1-235ENST00000428153 UGT1A1P22309 533 aa17.02■□□□□ 0.32
DDR1-235ENST00000428153 UGT1A4P22310 534 aa17.02■□□□□ 0.32
DDR1-235ENST00000428153 CD97P48960 835 aa17.02■□□□□ 0.32
DDR1-235ENST00000428153 ERV3-1Q14264 604 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms