RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 SYCE1LA8MT33 242 aa20.66■□□□□ 0.9
GPC1-202ENST00000420138 TMEM233B4DJY2 109 aa20.66■□□□□ 0.9
GPC1-202ENST00000420138 SUPT3HB4E1H0 165 aa20.66■□□□□ 0.9
GPC1-202ENST00000420138 HDAC3O15379 428 aa20.66■□□□□ 0.9
GPC1-202ENST00000420138 SUPT3HO75486 399 aa20.66■□□□□ 0.9
GPC1-202ENST00000420138 ATP6V1G2O95670 118 aa20.66■□□□□ 0.9
GPC1-202ENST00000420138 JUNP05412 331 aaKnown RBP20.66■□□□□ 0.9
GPC1-202ENST00000420138 ATP1B2P14415 290 aaPredicted RBP20.66■□□□□ 0.9
GPC1-202ENST00000420138 CTHP32929 405 aa20.66■□□□□ 0.9
GPC1-202ENST00000420138 HK2P52789 917 aa20.66■□□□□ 0.9
GPC1-202ENST00000420138 CNTN1Q12860 1018 aa20.66■□□□□ 0.9
GPC1-202ENST00000420138 PPP1R3AQ16821 1122 aa20.66■□□□□ 0.9
GPC1-202ENST00000420138 ZNF284Q2VY69 593 aa20.66■□□□□ 0.9
GPC1-202ENST00000420138 SPECC1L-ADORA2AF8WAN1 911 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 MMP20O60882 483 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 RECQL5O94762 991 aaPredicted RBP20.65■□□□□ 0.9
GPC1-202ENST00000420138 SUPT7LO94864 414 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 C6P13671 934 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 GFAPP14136 432 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 DGKAP23743 735 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 SEC13P55735 322 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 GBX1Q14549 363 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 SMAD2Q15796 467 aaKnown RBP20.65■□□□□ 0.9
GPC1-202ENST00000420138 ZNF648Q5T619 568 aaPredicted RBP20.65■□□□□ 0.9
GPC1-202ENST00000420138 DET1Q7L5Y6 550 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 CUZD1Q86UP6 607 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 FBXO39Q8N4B4 442 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 AADATQ8N5Z0 425 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 RILPQ96NA2 401 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 PANX3Q96QZ0 392 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 TRMOQ9BU70 441 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 C1QTNF3Q9BXJ4 246 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 CNOT6Q9ULM6 557 aaKnown RBP20.65■□□□□ 0.9
GPC1-202ENST00000420138 STK38LQ9Y2H1 464 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 FADS3Q9Y5Q0 445 aa20.65■□□□□ 0.9
GPC1-202ENST00000420138 PPP6CO00743 305 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 NPC1O15118 1278 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 SERPINA6P08185 405 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 OR56A5P0C7T3 313 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 TSPAN8P19075 237 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 TIE1P35590 1138 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 CDH13P55290 713 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 SATB1Q01826 763 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 KRT72Q14CN4 511 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 TGFBIQ15582 683 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 SH2D4BQ5SQS7 431 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 GPSM1Q86YR5 675 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 GLYATL1Q969I3 302 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 NSL1Q96IY1 281 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 NSUN5Q96P11 429 aaKnown RBP20.64■□□□□ 0.9
GPC1-202ENST00000420138 TRPV5Q9NQA5 729 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 DYRK4Q9NR20 520 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 ARMCX1Q9P291 453 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 TSR3Q9UJK0 312 aaKnown RBP20.64■□□□□ 0.9
GPC1-202ENST00000420138 ADAMTS6Q9UKP5 1117 aa20.64■□□□□ 0.9
GPC1-202ENST00000420138 CAPN14A8MX76 684 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 STX16-NPEPL1H3BU86 382 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 STX16O14662 325 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 MAGEC1O60732 1142 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 DIAPH2O60879 1101 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 RPS17P08708 135 aaKnown RBP20.64■□□□□ 0.89
GPC1-202ENST00000420138 AOAHP28039 575 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 PTPN4P29074 926 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 AKT1P31749 480 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 RGS4P49798 205 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 TAS2R38P59533 333 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 CRY1Q16526 586 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 FBXO48Q5FWF7 155 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 FAM46CQ5VWP2 391 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 FAM219BQ5XKK7 198 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 SEL1L3Q68CR1 1132 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 SLC44A3Q8N4M1 653 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 DLG3Q92796 817 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 ARL8BQ9NVJ2 186 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 KCTD5Q9NXV2 234 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 BAIAP2L1Q9UHR4 511 aa20.64■□□□□ 0.89
GPC1-202ENST00000420138 NCF1BA6NI72 391 aaPredicted RBP20.63■□□□□ 0.89
GPC1-202ENST00000420138 NCF1CA8MVU1 366 aaPredicted RBP20.63■□□□□ 0.89
GPC1-202ENST00000420138 SLCO1B7G3V0H7 640 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 MID1O15344 667 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 NCF1P14598 390 aaPredicted RBP20.63■□□□□ 0.89
GPC1-202ENST00000420138 EEF1DP29692 281 aaKnown RBP20.63■□□□□ 0.89
GPC1-202ENST00000420138 AGTR2P50052 363 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 CST6Q15828 149 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 LEXMQ3ZCV2 418 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 IER5LQ5T953 404 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 ZNF765Q7L2R6 523 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 ADAMTSL2Q86TH1 951 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 TREML1Q86YW5 311 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 MYO1HQ8N1T3 1032 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 MAGEC3Q8TD91 643 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 STON2Q8WXE9 905 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 RAB7BQ96AH8 199 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 DCUN1D1Q96GG9 259 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 OR52B2Q96RD2 323 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 CCDC106Q9BWC9 280 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 EML4Q9HC35 981 aaKnown RBP20.63■□□□□ 0.89
GPC1-202ENST00000420138 VTI1BQ9UEU0 232 aa20.63■□□□□ 0.89
GPC1-202ENST00000420138 APOBEC2Q9Y235 224 aaKnown RBP20.63■□□□□ 0.89
GPC1-202ENST00000420138 ASB1Q9Y576 335 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms