RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 PDCD10Q9BUL8 212 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 KANSL3Q9P2N6 904 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 PDE10AQ9Y233 779 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 TCAF1Q9Y4C2 921 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 SPEF2Q9C093 1822 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 MYH1P12882 1939 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 MYH4Q9Y623 1939 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 PGRMC2O15173 223 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 HTRA2O43464 458 aaPredicted RBP12.76□□□□□ -0.37
SCN1B-202ENST00000415950 AP2A2O94973 939 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 PGK1P00558 417 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 CAPGP40121 348 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 DIO3P55073 304 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 CREB5Q02930 508 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 IKBIPQ70UQ0 350 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 CPNE9Q8IYJ1 553 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 LRRC52Q8N7C0 313 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 PSMG2Q969U7 264 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 ZBTB26Q9HCK0 441 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 FZD10Q9ULW2 581 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 GPC6Q9Y625 555 aaPredicted RBP12.76□□□□□ -0.37
SCN1B-202ENST00000415950 LRRC14BA6NHZ5 514 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 E7ESA3 106 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 FAM72CH0Y354 149 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 BMP7P18075 431 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 IGFBP5P24593 272 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 PSMD4P55036 377 aaKnown RBP12.76□□□□□ -0.37
SCN1B-202ENST00000415950 FAM72AQ5TYM5 149 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 FAM72DQ6L9T8 149 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 AFTPHQ6ULP2 937 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 USP45Q70EL2 814 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 FAM72BQ86X60 149 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 LRRC49Q8IUZ0 686 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 AADATQ8N5Z0 425 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 C7orf57Q8NEG2 295 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 EEF1AKMT1Q8WVE0 214 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 XYLT2Q9H1B5 865 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 MAGEL2Q9UJ55 1249 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 ING4Q9UNL4 249 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 ZNF232Q9UNY5 417 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 ANGPT4Q9Y264 503 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 AP3M1Q9Y2T2 418 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 ATRNL1Q5VV63 1379 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 NRP1O14786 923 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 BCKDKO14874 412 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 TBX18O95935 607 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 FCGRTP55899 365 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 HMGCS1Q01581 520 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 TMEM86AQ8N2M4 240 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 CLIP4Q8N3C7 705 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 TXNDC5Q8NBS9 432 aaKnown RBP12.76□□□□□ -0.37
SCN1B-202ENST00000415950 NELL1Q92832 810 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 C11orf24Q96F05 449 aaPredicted RBP12.76□□□□□ -0.37
SCN1B-202ENST00000415950 DIRAS2Q96HU8 199 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 MYOCQ99972 504 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 SLC39A8Q9C0K1 460 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 FZD8Q9H461 694 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 SMURF2Q9HAU4 748 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 FAM92AA1XBS5 289 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 ARPC2O15144 300 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 RGS10O43665 173 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 SNAP29O95721 258 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 S100A9P06702 114 aaKnown RBP12.76□□□□□ -0.37
SCN1B-202ENST00000415950 ELK4P28324 431 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 PRDX6P30041 224 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 STAT5AP42229 794 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 UGT2B15P54855 530 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 ATP6V0D1P61421 351 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 POLR2LP62875 67 aaKnown RBP12.76□□□□□ -0.37
SCN1B-202ENST00000415950 BTG3Q14201 252 aaPredicted RBP12.76□□□□□ -0.37
SCN1B-202ENST00000415950 CCNYL2Q5T2Q4 361 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 TRIM40Q6P9F5 258 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 FEM1CQ96JP0 617 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 Q96MT0 163 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 SLC29A1Q99808 456 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 TRMOQ9BU70 441 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 FNDC11Q9BVV2 318 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 BCL2L14Q9BZR8 327 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 ATG10Q9H0Y0 220 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 RWDD3Q9Y3V2 267 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 CNTNAP1P78357 1384 aa12.76□□□□□ -0.37
SCN1B-202ENST00000415950 MED1Q15648 1581 aaPredicted RBP12.76□□□□□ -0.37
SCN1B-202ENST00000415950 TREHO43280 583 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 BCAS2O75934 225 aaPredicted RBP12.75□□□□□ -0.37
SCN1B-202ENST00000415950 SMIM10L2AP0DMW4 78 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 SMIM10L2BP0DMW5 78 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 NTSP30990 170 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 CYP2C18P33260 490 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 CLCNKBP51801 687 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 ZNF135P52742 658 aaPredicted RBP12.75□□□□□ -0.37
SCN1B-202ENST00000415950 FKBP1AP62942 108 aaKnown RBP12.75□□□□□ -0.37
SCN1B-202ENST00000415950 PPIL2Q13356 520 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 FAM174BQ3ZCQ3 159 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 SLC25A24Q6NUK1 477 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 PAQR3Q6TCH7 311 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 ARFGAP1Q8N6T3 406 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 OR52L1Q8NGH7 329 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 CRYGNQ8WXF5 182 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 STARD8Q92502 1023 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 CEP295NLQ96MC4 621 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms