RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 MAGEE1Q9HCI5 957 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 CNOT6Q9ULM6 557 aaKnown RBP13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 SHOC2Q9UQ13 582 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 EFR3BQ9Y2G0 817 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 USP9YO00507 2555 aaPredicted RBP13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 A1L4Q6 167 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 PIPSLA2A3N6 862 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 FADS2P1A8MWK0 482 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 CREG1O75629 220 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 NDST3O95803 873 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 MT-CYBP00156 380 aaPredicted RBP13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 SLC4A1P02730 911 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 SLC2A4P14672 509 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 TYRP1P17643 537 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 LEPRP48357 1165 aaKnown RBP13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 SPINT3P49223 89 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 GSDMDP57764 484 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 UBE2IP63279 158 aaKnown RBP13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 DNASE1L3Q13609 305 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 SLC14A2Q15849 920 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 FAM182AQ5T1J6 154 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 ITPRIPL1Q6GPH6 555 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 DARS2Q6PI48 645 aaKnown RBP13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 LRRC45Q96CN5 670 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 TGM7Q96PF1 710 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 PLEKHG4BQ96PX9 1271 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 SPATA16Q9BXB7 569 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 LACRTQ9GZZ8 138 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 SCHIP1Q9P0W5 487 aaPredicted RBP13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 RSPH14Q9UHP6 348 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 LNPEPQ9UIQ6 1025 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 KCND3Q9UK17 655 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 REXO2Q9Y3B8 237 aaKnown RBP13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 SLC30A1Q9Y6M5 507 aa13.01□□□□□ -0.33
CTHRC1-202ENST00000415886 TNRC6AQ8NDV7 1962 aaKnown RBP13□□□□□ -0.33
CTHRC1-202ENST00000415886 MIF4GDA9UHW6 222 aaKnown RBP13□□□□□ -0.33
CTHRC1-202ENST00000415886 ZNF189O75820 626 aaPredicted RBP13□□□□□ -0.33
CTHRC1-202ENST00000415886 UBXN7O94888 489 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 EPOP01588 193 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 PIRTP0C851 137 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 NFKB1P19838 968 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 WNT3AP56704 352 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 EIF3EP60228 445 aaKnown RBP13□□□□□ -0.33
CTHRC1-202ENST00000415886 ADCY2Q08462 1091 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 WASHC5Q12768 1159 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 NADK2Q4G0N4 442 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 PHYKPLQ8IUZ5 450 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 CDKL3Q8IVW4 592 aaPredicted RBP13□□□□□ -0.33
CTHRC1-202ENST00000415886 ZNF567Q8N184 647 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 SLC25A41Q8N5S1 370 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 ACTL9Q8TC94 416 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 CT55Q8WUE5 264 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 QKIQ96PU8 341 aaKnown RBP eCLIP13□□□□□ -0.33
CTHRC1-202ENST00000415886 FCRL5Q96RD9 977 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 TRIB3Q96RU7 358 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 RUFY1Q96T51 708 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 DESI2Q9BSY9 194 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 FSD1LQ9BXM9 530 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 OSGEPL1Q9H4B0 414 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 ZNF768Q9H5H4 540 aaKnown RBP13□□□□□ -0.33
CTHRC1-202ENST00000415886 PCDHGA6Q9Y5G7 932 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 ICE1Q9Y2F5 2266 aa13□□□□□ -0.33
CTHRC1-202ENST00000415886 OR5K4A6NMS3 321 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 F5H423 210 aaPredicted RBP12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 GRID2O43424 1007 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 NRDCO43847 1150 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 KIF1CO43896 1103 aaKnown RBP12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 NUAK1O60285 661 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 SPAG6O75602 509 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 RASSF9O75901 435 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 ANXA9O76027 345 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 SLC25A14O95258 325 aaPredicted RBP12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 TIAF1O95411 115 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 PYGMP11217 842 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 AMD1P17707 334 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 RBL1P28749 1068 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 OTUD4Q01804 1114 aaKnown RBP12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 MPP3Q13368 585 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 SEMA5AQ13591 1074 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 IL11RAQ14626 422 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 PLA2G4EQ3MJ16 856 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 ZNF648Q5T619 568 aaPredicted RBP12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 HENMT1Q5T8I9 393 aaKnown RBP12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 ALS2CLQ60I27 953 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 CPZQ66K79 652 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 TMEM26Q6ZUK4 368 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 TMC3Q7Z5M5 1100 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 APLFQ8IW19 511 aaPredicted RBP12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 RNF10Q8N5U6 811 aaKnown RBP12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 AVL9Q8NBF6 648 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 TTC13Q8NBP0 860 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 IPMKQ8NFU5 416 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 RSC1A1Q92681 617 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 TTC25Q96NG3 672 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 ZSCAN5AQ9BUG6 496 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 TSGA10Q9BZW7 698 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 TRABDQ9H4I3 376 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 ACTL8Q9H568 366 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 RMI1Q9H9A7 625 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 UCK1Q9HA47 277 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms