RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 DKK3Q9UBP4 350 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 APPL1Q9UKG1 709 aa11.45□□□□□ -0.58
RFFL-205ENST00000415395 COPG1Q9Y678 874 aaKnown RBP11.45□□□□□ -0.58
RFFL-205ENST00000415395 PRRC2BQ5JSZ5 2229 aaKnown RBP11.45□□□□□ -0.58
RFFL-205ENST00000415395 C1orf232A0A0U1RR37 186 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 GPC4O75487 556 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 PGM3O95394 542 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 RBP1P09455 135 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 SLC35E2BP0CK96 405 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 SAT1P21673 171 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 GKP32189 559 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 HNF1BP35680 557 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 ATP4BP51164 291 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 PSME3P61289 254 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 CACNG1Q06432 222 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 GALNT1Q10472 559 aaPredicted RBP11.44□□□□□ -0.58
RFFL-205ENST00000415395 CEACAM7Q14002 265 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 TRIM25Q14258 630 aaKnown RBP11.44□□□□□ -0.58
RFFL-205ENST00000415395 CDKN3Q16667 212 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 SAMD4BQ5PRF9 694 aaKnown RBP11.44□□□□□ -0.58
RFFL-205ENST00000415395 AGAP9Q5VTM2 703 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 PRMT9Q6P2P2 845 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 CERS6Q6ZMG9 384 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 LYSMD3Q7Z3D4 306 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 SLC41A1Q8IVJ1 513 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 STK40Q8N2I9 435 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 EFCAB3Q8N7B9 438 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 CCNYL1Q8N7R7 359 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 SMRP1Q8NCR6 262 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 KCTD4Q8WVF5 259 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 DUS3LQ96G46 650 aaKnown RBP11.44□□□□□ -0.58
RFFL-205ENST00000415395 OMDQ99983 421 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 GTSE1Q9NYZ3 720 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 MARCH4Q9P2E8 410 aaPredicted RBP11.44□□□□□ -0.58
RFFL-205ENST00000415395 IL36AQ9UHA7 158 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 ZDHHC2Q9UIJ5 367 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 G3BP2Q9UN86 482 aaKnown RBP11.44□□□□□ -0.58
RFFL-205ENST00000415395 AP4S1Q9Y587 144 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 COMMD10Q9Y6G5 202 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 BPTFQ12830 3046 aa11.44□□□□□ -0.58
RFFL-205ENST00000415395 EDDM13A0A1B0GTR0 161 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 OR51F1A6NGY5 319 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 OTOL1A6NHN0 477 aaPredicted RBP11.43□□□□□ -0.58
RFFL-205ENST00000415395 BBIP1A8MTZ0 92 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 TTC34A8MYJ7 566 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 TARM1B6A8C7 271 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 CCL22O00626 93 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 ACOT8O14734 319 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 DLX3O60479 287 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 SRP72O76094 671 aaKnown RBP11.43□□□□□ -0.58
RFFL-205ENST00000415395 TFAP2AP05549 437 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 UGT2B4P06133 528 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 ALPIP09923 528 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 ETS2P15036 469 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 ZNF30P17039 623 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 CTPS1P17812 591 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 CD9P21926 228 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 MC4RP32245 332 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 GJA4P35212 333 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 LTBRP36941 435 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 OPRD1P41143 372 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 RGS19P49795 217 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 ADARP55265 1226 aaKnown RBP11.43□□□□□ -0.58
RFFL-205ENST00000415395 STX1BP61266 288 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 DLX2Q07687 328 aaPredicted RBP11.43□□□□□ -0.58
RFFL-205ENST00000415395 PDAP1Q13442 181 aaKnown RBP11.43□□□□□ -0.58
RFFL-205ENST00000415395 APOFQ13790 326 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 PTPRCAPQ14761 206 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 ITPRIPL2Q3MIP1 535 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 NADK2Q4G0N4 442 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 HECTD2Q5U5R9 776 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 LYPLAL1Q5VWZ2 237 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 PCYOX1LQ8NBM8 494 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 MIPOL1Q8TD10 442 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 PRPF18Q99633 342 aaKnown RBP11.43□□□□□ -0.58
RFFL-205ENST00000415395 PKP2Q99959 881 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 TRMT61BQ9BVS5 477 aaKnown RBP11.43□□□□□ -0.58
RFFL-205ENST00000415395 PLA2G2FQ9BZM2 168 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 POMKQ9H5K3 350 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 SPAG4Q9NPE6 437 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 PNPLA3Q9NST1 481 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 FKBPLQ9UIM3 349 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 SARDHQ9UL12 918 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 VWA7Q9Y334 891 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 GMEB1Q9Y692 573 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 SLC30A1Q9Y6M5 507 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 LAMA3Q16787 3333 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 TNRC18O15417 2968 aaPredicted RBP11.43□□□□□ -0.58
RFFL-205ENST00000415395 PRRT4C9JH25 899 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 NPC1O15118 1278 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 UBDO15205 165 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 PHGDHO43175 533 aaKnown RBP11.43□□□□□ -0.58
RFFL-205ENST00000415395 BNIP3LO60238 219 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 PRNPP04156 253 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 CYP2A6P11509 494 aaPredicted RBP11.43□□□□□ -0.58
RFFL-205ENST00000415395 SLC7A1P30825 629 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 ABCG1P45844 678 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 SLC6A11P48066 632 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 SUOXP51687 545 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 PKNOX1P55347 436 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms