RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 J3QR06 171 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 DVL1O14640 695 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 NDUFS4O43181 175 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 AHCYL1O43865 530 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 ENTPD3O75355 529 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 AHRP35869 848 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 TERF1P54274 439 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 MLLT10P55197 1068 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 SNX16P57768 344 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 RPL24P83731 157 aaKnown RBP3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 STK4Q13043 487 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 DLG2Q15700 870 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 C15orf59Q2T9L4 293 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 ACCSLQ4AC99 568 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 ADGRA1Q86SQ6 560 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 NFE4Q86UQ8 179 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 TAGAPQ8N103 731 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 C1orf52Q8N6N3 182 aaKnown RBP3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 OR52I2Q8NH67 350 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 PPP4R1Q8TF05 950 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 CD101Q93033 1021 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 SMC6Q96SB8 1091 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 DDOQ99489 341 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 HGH1Q9BTY7 390 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 LRMDAQ9H2I8 198 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 DNAJC18Q9H819 358 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 ABCF3Q9NUQ8 709 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 ARHGEF38Q9NXL2 777 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 DONSONQ9NYP3 566 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 B3GALT5Q9Y2C3 310 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 YIPF1Q9Y548 306 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 ARAP1Q96P48 1450 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 ASTN2O75129 1339 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 ZNF541Q9H0D2 1346 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 C5orf60A6NFR6 353 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 C15orf62A8K5M9 175 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 TMEM178BH3BS89 294 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 TMEM189-UBE2V1I3L0A0 370 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 BMPR1BO00238 502 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 ZBTB43O43298 467 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 SYNGR3O43761 229 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 RSL1D1O76021 490 aaKnown RBP3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 PDE9AO76083 593 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 IGHV4-39P01824 125 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 TRIM21P19474 475 aaKnown RBP3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 BDNFP23560 247 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 NR2F2P24468 414 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 EIF2DP41214 584 aaKnown RBP3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 NRIP1P48552 1158 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 AMPHP49418 695 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 HOXA1P49639 335 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 ARSEP51690 589 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 ARL16Q0P5N6 197 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 UBE2V1Q13404 147 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 FAM76BQ5HYJ3 339 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 STXBP5Q5T5C0 1151 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 FAM171BQ6P995 826 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 RAD9BQ6WBX8 426 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 SMIM29Q86T20 159 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 KBTBD6Q86V97 674 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 METTL27Q8N6F8 245 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 MAB21L3Q8N8X9 362 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 RDM1Q8NG50 284 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 SMPDL3BQ92485 455 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 JAKMIP2Q96AA8 810 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 SLC22A18Q96BI1 424 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 SCRN2Q96FV2 425 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 ABHD8Q96I13 439 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 KIFC3Q9BVG8 833 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 MRPL1Q9BYD6 325 aaKnown RBP3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 RTN4RQ9BZR6 473 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 PPIL3Q9H2H8 161 aaKnown RBP3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 MARCH4Q9P2E8 410 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 SWAP70Q9UH65 585 aa3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 WBP11Q9Y2W2 641 aaKnown RBP3.64□□□□□ -1.83
HMGB1P11-201ENST00000413899 TNIKQ9UKE5 1360 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 EIF4G3O43432 1585 aaKnown RBP3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 PCF11O94913 1555 aaKnown RBP3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 SAMD9Q5K651 1589 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 CACNA1IQ9P0X4 2223 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 A0A0G2JNG1 304 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 GLOD5A6NK44 160 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 PRR23D1E9PI22 279 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 C16orf97H3BN30 126 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 ADAMDEC1O15204 470 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 AVILO75366 819 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 BEST1O76090 585 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 PRR23D2P0DMB1 279 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 NR2F1P10589 423 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 CETPP11597 493 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 CSF2RAP15509 400 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 SAT1P21673 171 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 MCCP23508 829 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 NMBRP28336 390 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 ACTN2P35609 894 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 PSMC6P62333 389 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 SIRPAP78324 504 aa3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 BAATQ14032 418 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P11-201ENST00000413899 KIR2DS5Q14953 304 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms