RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 PRKD3O94806 890 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 PNLIPRP1P54315 467 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 LILRA4P59901 499 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 GNA12Q03113 381 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 CBX2Q14781 532 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 DEF8Q6ZN54 512 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 PIK3R3Q92569 461 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 FERD3LQ96RJ6 166 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 CIB1Q99828 191 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 C3orf14Q9HBI5 128 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 ASF1AQ9Y294 204 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 FAM172BPA6NC97 362 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 FOXO6A8MYZ6 492 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 GABRDO14764 452 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 TREHO43280 583 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 C1RP00736 705 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 FABP3P05413 133 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 CYP4B1P13584 511 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 LAG3P18627 525 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 PEX2P28328 305 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 GABRR2P28476 465 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 LAPTM5Q13571 262 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 VPS26BQ4G0F5 336 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 ERI1Q8IV48 349 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 SVOPLQ8N434 492 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 NAT8LQ8N9F0 302 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 PLD4Q96BZ4 506 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 ZNF285Q96NJ3 590 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 INTS10Q9NVR2 710 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 CFAP97Q9P2B7 532 aa13.6□□□□□ -0.23
SMARCA4-202ENST00000413806 PLK4O00444 970 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 SCAMP3O14828 347 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 PER2O15055 1255 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 APOL3O95236 402 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 IL1BP01584 269 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 NR2F6P10588 404 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 HNF4AP41235 474 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 CLCNKBP51801 687 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 AP1S1P61966 158 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 RBM20Q5T481 1227 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 ZNF613Q6PF04 617 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 C17orf64Q86WR6 236 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 COMMD2Q86X83 199 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 CACUL1Q86Y37 369 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 NTAN1Q96AB6 310 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 ALG2Q9H553 416 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 MIOSQ9NXC5 875 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 PADI3Q9ULW8 664 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 SLC27A6Q9Y2P4 619 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 ARPC4-TTLL3A0A0A6YYG9 625 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 FGBP02675 491 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 IGFBP5P24593 272 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 CTNNB1P35222 781 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 HERC3Q15034 1050 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 SLC10A6Q3KNW5 377 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 C2orf15Q8WU43 125 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 HMCESQ96FZ2 354 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 IPPKQ9H8X2 491 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 DTLQ9NZJ0 730 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 TBC1D14Q9P2M4 693 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 BCKDKO14874 412 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 INSIG1O15503 277 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 C22orf31O95567 290 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 SDC2P34741 201 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 GTF2H2Q13888 395 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 NOL9Q5SY16 702 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 GTF2H2CQ6P1K8 395 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 CXXC5Q7LFL8 322 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 BEND7Q8N7W2 519 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 RNASE11Q8TAA1 199 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 HM13Q8TCT9 377 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 ZFAND2BQ8WV99 257 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 AIF1LQ9BQI0 150 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 TRIT1Q9H3H1 467 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 TRPS1Q9UHF7 1281 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 DLG5Q8TDM6 1919 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 A0A1B0GVM2 712 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 TCAF2A6NFQ2 919 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 FPGTO14772 594 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 UGT2B17O75795 530 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 GOT2P00505 430 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 SELPP16109 830 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 HTR1BP28222 390 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 KCTD8Q6ZWB6 473 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 PIH1D2Q8WWB5 315 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 AASDHPPTQ9NRN7 309 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 TMEM59LQ9UK28 342 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 PEX16Q9Y5Y5 336 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 OR10H2O60403 315 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 RPS9P46781 194 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 MANFP55145 182 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 USF2Q15853 346 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 ALG11Q2TAA5 492 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 HKDC1Q2TB90 917 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 GCNT6Q5T4J0 391 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 IL23RQ5VWK5 629 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 HMBOX1Q6NT76 420 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 SPATA22Q8NHS9 363 aa13.59□□□□□ -0.23
SMARCA4-202ENST00000413806 APOLD1Q96LR9 279 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms