RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 CTAGE8P0CG41 777 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 XRCC1P18887 633 aaPredicted RBP8.08□□□□□ -1.12
RPE-204ENST00000411934 AK4P27144 223 aaPredicted RBP8.08□□□□□ -1.12
RPE-204ENST00000411934 ARNTP27540 789 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 NMBRP28336 390 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 HALP42357 657 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 ARCN1P48444 511 aaKnown RBP8.08□□□□□ -1.12
RPE-204ENST00000411934 CD151P48509 253 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 CTSCP53634 463 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 ITGA8P53708 1063 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 GPLD1P80108 840 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 TMPRSS15P98073 1019 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 B4GALNT1Q00973 533 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 C2orf54Q08AI8 447 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 SQSTM1Q13501 440 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 LONRF1Q17RB8 773 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 ANKRD20A4Q4UJ75 823 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 SPANXN3Q5MJ09 141 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 N4BP2L1Q5TBK1 243 aaPredicted RBP8.08□□□□□ -1.12
RPE-204ENST00000411934 CASC4Q6P4E1 433 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 IYDQ6PHW0 289 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 TMEM220Q6QAJ8 160 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 CRTC3Q6UUV7 619 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 CEP128Q6ZU80 1094 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 TAS2R42Q7RTR8 314 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 TMPRSS7Q7RTY8 843 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 SDCCAG8Q86SQ7 713 aaPredicted RBP8.08□□□□□ -1.12
RPE-204ENST00000411934 SLC9B2Q86UD5 537 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 CTAGE6Q86UF2 777 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 CTAGE4Q8IX94 777 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 PIANPQ8IYJ0 282 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 MMGT1Q8N4V1 131 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 OR6P1Q8NGX9 317 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 CCL4L1Q8NHW4 92 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 IFI44Q8TCB0 444 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 ZFPM2Q8WW38 1151 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 MFSD3Q96ES6 412 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 STAMBPL1Q96FJ0 436 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 PANX3Q96QZ0 392 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 EBNA1BP2Q99848 306 aaKnown RBP8.08□□□□□ -1.12
RPE-204ENST00000411934 TRIM51Q9BSJ1 452 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 CCM2Q9BSQ5 444 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 FAM167BQ9BTA0 163 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 SUDS3Q9H7L9 328 aaPredicted RBP8.08□□□□□ -1.12
RPE-204ENST00000411934 KLC4Q9NSK0 619 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 SPATS2LQ9NUQ6 558 aaKnown RBP8.08□□□□□ -1.12
RPE-204ENST00000411934 INTS10Q9NVR2 710 aaKnown RBP8.08□□□□□ -1.12
RPE-204ENST00000411934 SLC2A6Q9UGQ3 507 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 WASF3Q9UPY6 502 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 NEUROG3Q9Y4Z2 214 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 PCDHB1Q9Y5F3 818 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 ST14Q9Y5Y6 855 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 HEBP2Q9Y5Z4 205 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 COMMD10Q9Y6G5 202 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 RPS6KL1Q9Y6S9 549 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 FAM169AQ9Y6X4 670 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 BPTFQ12830 3046 aa8.08□□□□□ -1.12
RPE-204ENST00000411934 GOLGA4Q13439 2230 aaKnown RBP8.08□□□□□ -1.12
RPE-204ENST00000411934 OR2AG2A6NM03 316 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 TMX2-CTNND1H3BSU7 103 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 GOLGA8MH3BSY2 632 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 NTN3O00634 580 aaPredicted RBP8.07□□□□□ -1.12
RPE-204ENST00000411934 KPNA5O15131 536 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 TP73O15350 636 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 CD3EAPO15446 510 aaKnown RBP8.07□□□□□ -1.12
RPE-204ENST00000411934 SGTAO43765 313 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 POP7O75817 140 aaKnown RBP8.07□□□□□ -1.12
RPE-204ENST00000411934 GSTA2P09210 222 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 NDUFS1P28331 727 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 RPL21P46778 160 aaKnown RBP8.07□□□□□ -1.12
RPE-204ENST00000411934 UBE2IP63279 158 aaKnown RBP8.07□□□□□ -1.12
RPE-204ENST00000411934 CRADDP78560 199 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 HHEXQ03014 270 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 DNAJC3Q13217 504 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 CRYMQ14894 314 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 ZNF658BQ4V348 819 aaPredicted RBP8.07□□□□□ -1.12
RPE-204ENST00000411934 FNBP1LQ5T0N5 605 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.07□□□□□ -1.12
RPE-204ENST00000411934 METRNLQ641Q3 311 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 STEAP4Q687X5 459 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 GUSBP11Q6P575 273 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 KIAA0408Q6ZU52 694 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 CENPUQ71F23 418 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 EFL1Q7Z2Z2 1120 aaKnown RBP8.07□□□□□ -1.12
RPE-204ENST00000411934 SLCO6A1Q86UG4 719 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 CNTN4Q8IWV2 1026 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 ARL14Q8N4G2 192 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.07□□□□□ -1.12
RPE-204ENST00000411934 SLC37A2Q8TED4 501 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 ZNF592Q92610 1267 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 ZNF669Q96BR6 464 aaPredicted RBP8.07□□□□□ -1.12
RPE-204ENST00000411934 SGF29Q96ES7 293 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 DEPDC7Q96QD5 511 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 CCDC3Q9BQI4 270 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 CARD6Q9BX69 1037 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 TSPYL1Q9H0U9 437 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 OSGEPL1Q9H4B0 414 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 ARFGAP3Q9NP61 516 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 KLHL42Q9P2K6 505 aa8.07□□□□□ -1.12
RPE-204ENST00000411934 TBC1D29Q9UFV1 150 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms