RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 C8orf59Q8N0T1 100 aaPredicted RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 MFSD3Q96ES6 412 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CCSER2Q9H7U1 834 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CCDC182A6NF36 153 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 PDE9AO76083 593 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 FAM58BPP0C7Q3 252 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 ADH5P11766 374 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 SCTRP47872 440 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 TSPAN5P62079 268 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 BNIP3Q12983 259 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CMC1Q7Z7K0 106 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 DAGLBQ8NCG7 672 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 PSMA8Q8TAA3 256 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CPT1CQ8TCG5 803 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 SH3YL1Q96HL8 342 aaPredicted RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 APOPT1Q96IL0 206 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CHID1Q9BWS9 393 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CHIAQ9BZP6 476 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 NOL11Q9H8H0 719 aaKnown RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 ERVW-1Q9UQF0 538 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 URB1O60287 2271 aaKnown RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 MAGEA13PA6NCF6 341 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 VSTM5A8MXK1 200 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 MUSKO15146 869 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 INPPL1O15357 1258 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 TSPAN1O60635 241 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 FAM153BP0C7A2 387 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 SPAM1P38567 509 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 FAM153CQ494X1 144 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 ZNF627Q7L945 461 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CMTR2Q8IYT2 770 aaKnown RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 ZBTB2Q8N680 514 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 OR4K17Q8NGC6 315 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 SYN2Q92777 582 aaPredicted RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 KIAA1143Q96AT1 154 aaPredicted RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CCDC115Q96NT0 180 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 NINJ2Q9NZG7 142 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 PCDHGC5Q9Y5F6 944 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CPN2P22792 545 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 BLKP51451 505 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 IRAK1P51617 712 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 ITGA1P56199 1179 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 GAD2Q05329 585 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 RAB39AQ14964 217 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 NDUFA5Q16718 116 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 LRRC70Q7Z2Q7 622 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 SCAMP5Q8TAC9 235 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 NUS1Q96E22 293 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CDH19Q9H159 772 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 DNAJC18Q9H819 358 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 PGRMC2O15173 223 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 RPP14O95059 124 aaKnown RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 GRK6P43250 576 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 RPL14P50914 215 aaKnown RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CLEC12AQ5QGZ9 265 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 C1orf189Q5VU69 101 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 NEK5Q6P3R8 708 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 OR10H4Q8NGA5 316 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 BORCS8Q96FH0 119 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 PCED1BQ96HM7 432 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CST11Q9H112 138 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 ADAP2Q9NPF8 381 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 GKN1Q9NS71 199 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 AP2A2O94973 939 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 GBAP04062 536 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 SMPD1P17405 629 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 ELP6Q0PNE2 266 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 MSANTD1Q6ZTZ1 278 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 CLNKQ7Z7G1 428 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 PYROXD2Q8N2H3 581 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 GATSQ8NAP1 163 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 PLA2G15Q8NCC3 412 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 GALNT11Q8NCW6 608 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 PRICKLE1Q96MT3 831 aaPredicted RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 GSDMCQ9BYG8 508 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 FAM86C2PA6NEL3 165 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 SLC33A1O00400 549 aaPredicted RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 SUV39H1O43463 412 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 UBXN7O94888 489 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 C8orf89P0DMQ9 161 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 COL6A1P12109 1028 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 TACR2P21452 398 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 CFL1P23528 166 aaKnown RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 VARSP26640 1264 aaKnown RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 HKDC1Q2TB90 917 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 TMC3Q7Z5M5 1100 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 MREGQ8N565 214 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 OR2L8Q8NGY9 312 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 MBOAT7Q96N66 472 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 MTERF1Q99551 399 aaKnown RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 TMBIM4Q9HC24 238 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 TMEM150CB9EJG8 249 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 CPNE3O75131 537 aaKnown RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 NCBP2P52298 156 aaKnown RBP eCLIP8.32□□□□□ -1.085e-8■□□□□ 9.1
SCN9A-203ENST00000409672 WNT3AP56704 352 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 TRAP1Q12931 704 aaKnown RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 ZHX1-C8orf76Q96EF9 292 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 A0A0X1KG70 313 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 CDC7O00311 574 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms