RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 ELOVL4Q9GZR5 314 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 OSGEPQ9NPF4 335 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 ZDHHC9Q9Y397 364 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 SLC25A27O95847 323 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 RENP00797 406 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 UGT2B10P36537 528 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 TMEM62Q0P6H9 643 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 SNAPC2Q13487 334 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 KLHDC10Q6PID8 442 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 FOXR1Q6PIV2 292 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 HID1Q8IV36 788 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 CBR4Q8N4T8 237 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 YTHDF1Q9BYJ9 559 aaKnown RBP13.72□□□□□ -0.21
AFF3-202ENST00000409236 OR10A4Q9H209 315 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 HCN3Q9P1Z3 774 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 ZNF70Q9UC06 446 aaPredicted RBP13.72□□□□□ -0.21
AFF3-202ENST00000409236 CCDC71Q8IV32 467 aaPredicted RBP13.72□□□□□ -0.21
AFF3-202ENST00000409236 TRMT2AQ8IZ69 625 aaKnown RBP13.72□□□□□ -0.21
AFF3-202ENST00000409236 HERC2P3Q9BVR0 1158 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 ANKRD33BA6NCL7 494 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 ST3GAL4Q11206 333 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 DCST2Q5T1A1 773 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 KCNT2Q6UVM3 1135 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 CAND1Q86VP6 1230 aaKnown RBP13.72□□□□□ -0.21
AFF3-202ENST00000409236 PMM1Q92871 262 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 ATP13A1Q9HD20 1204 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 PCDHB16Q9NRJ7 776 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 SH3BGRLO75368 114 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 GPRC6AQ5T6X5 926 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 SLC5A7Q9GZV3 580 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 THUMPD1Q9NXG2 353 aaKnown RBP13.72□□□□□ -0.21
AFF3-202ENST00000409236 LOXHD1Q8IVV2 1947 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 CNTNAP2Q9UHC6 1331 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 RAB36O95755 333 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 MAPTP10636 758 aaKnown RBP13.72□□□□□ -0.21
AFF3-202ENST00000409236 MAGEA11P43364 429 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 CDH13P55290 713 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 BTBD16Q32M84 506 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 DENND2DQ9H6A0 471 aaPredicted RBP13.72□□□□□ -0.21
AFF3-202ENST00000409236 SLC9A3R1O14745 358 aaPredicted RBP13.72□□□□□ -0.21
AFF3-202ENST00000409236 ZNF823P16415 610 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 MVKQ03426 396 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 NKAPLQ5M9Q1 402 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 DHX33Q9H6R0 707 aaKnown RBP13.72□□□□□ -0.21
AFF3-202ENST00000409236 KANSL3Q9P2N6 904 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 FAM230AA0A1W2PPH8 454 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 SH3PXD2BA1X283 911 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 ATE1O95260 518 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 MC1RQ01726 317 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 BATFQ16520 125 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 ZBED5Q49AG3 693 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 ZNF571Q7Z3V5 609 aaPredicted RBP13.72□□□□□ -0.21
AFF3-202ENST00000409236 ALLCQ8N6M5 410 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 GSTCDQ8NEC7 633 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 CHST13Q8NET6 341 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 COMMD3Q9UBI1 195 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 TFR2Q9UP52 801 aa13.72□□□□□ -0.21
AFF3-202ENST00000409236 HTR1BP28222 390 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 DNAJA1P31689 397 aaKnown RBP13.71□□□□□ -0.21
AFF3-202ENST00000409236 RBFAQ8N0V3 343 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 IFT27Q9BW83 186 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 KCNH7Q9NS40 1196 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.71□□□□□ -0.21
AFF3-202ENST00000409236 U3KQV3 271 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 CPS1P31327 1500 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 A8MVJ9 347 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 GTF2F2P13984 249 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 BST1Q10588 318 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 C5orf34Q96MH7 638 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 RHBGQ9H310 441 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 PCDHB12Q9Y5F1 795 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 ARPC2O15144 300 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 TRAM1Q15629 374 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 PROSER3Q2NL68 480 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 MOXD1Q6UVY6 613 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 PSKH2Q96QS6 385 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 IFT52Q9Y366 437 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 FRMPD1Q5SYB0 1578 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 TP73O15350 636 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 IL7P13232 177 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 DUSP4Q13115 394 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 FADDQ13158 208 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 MAD2L1BPQ15013 274 aaPredicted RBP13.71□□□□□ -0.21
AFF3-202ENST00000409236 GJB7Q6PEY0 223 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 UPF1Q92900 1129 aaKnown RBP eCLIP13.71□□□□□ -0.21
AFF3-202ENST00000409236 TARS2Q9BW92 718 aaKnown RBP13.71□□□□□ -0.21
AFF3-202ENST00000409236 COPS7AQ9UBW8 275 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 NME7Q9Y5B8 376 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 EFCAB6Q5THR3 1501 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 MUSKO15146 869 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 GABBR2O75899 941 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 CYP3A4P08684 503 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 CLCA4Q14CN2 919 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 FBXO47Q5MNV8 452 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 TFAP2DQ7Z6R9 452 aa13.71□□□□□ -0.21
AFF3-202ENST00000409236 DDX43Q9NXZ2 648 aaKnown RBP13.71□□□□□ -0.21
AFF3-202ENST00000409236 DAPL1A0PJW8 107 aa13.71□□□□□ -0.22
AFF3-202ENST00000409236 CCR10P46092 362 aa13.71□□□□□ -0.22
AFF3-202ENST00000409236 ERVK-9P63128 1117 aa13.71□□□□□ -0.22
AFF3-202ENST00000409236 ZNF529Q6P280 563 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms