RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 VNN1O95497 513 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 TFAP2AP05549 437 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 DNAJA1P31689 397 aaKnown RBP17.48■□□□□ 0.39
SMPD4-202ENST00000409031 ATP4BP51164 291 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 GRIK4Q16099 956 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 PIGGQ5H8A4 983 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 PIK3R6Q5UE93 754 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 TATDN1Q6P1N9 297 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 USP30Q70CQ3 517 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 FAM35AQ86V20 835 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 C10orf53Q8N6V4 93 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 CCDC185Q8N715 623 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 OR9I1Q8NGQ6 314 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 AMBNQ9NP70 447 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 NECTIN3Q9NQS3 549 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 PAK6Q9NQU5 681 aaPredicted RBP17.48■□□□□ 0.39
SMPD4-202ENST00000409031 RAB23Q9ULC3 237 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 CEPT1Q9Y6K0 416 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 SNAP29O95721 258 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 PIRTP0C851 137 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 ATP6AP1Q15904 470 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 TSTD2Q5T7W7 516 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 COLEC11Q9BWP8 271 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 POLR2J2Q9GZM3 115 aaKnown RBP17.48■□□□□ 0.39
SMPD4-202ENST00000409031 SMOXQ9NWM0 555 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 OR4F21O95013 312 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 YWHAQP27348 245 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 SLC6A4P31645 630 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 ICAM3P32942 547 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 NDST2P52849 883 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 CCBE1Q6UXH8 406 aaPredicted RBP17.47■□□□□ 0.39
SMPD4-202ENST00000409031 ZC3HC1Q86WB0 502 aaKnown RBP17.47■□□□□ 0.39
SMPD4-202ENST00000409031 PHC2Q8IXK0 858 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 LGI2Q8N0V4 545 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 PLIN4Q96Q06 1357 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 IPPKQ9H8X2 491 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 NUDT4Q9NZJ9 180 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 KRBA1A5PL33 1030 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 GPR182O15218 404 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 CHRNA1P02708 482 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 SLC2A2P11168 524 aaPredicted RBP17.47■□□□□ 0.39
SMPD4-202ENST00000409031 PRPS2P11908 318 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 L1CAMP32004 1257 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 BMXP51813 675 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 FAM174BQ3ZCQ3 159 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 SULT1C3Q6IMI6 304 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 FBXO27Q8NI29 283 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 TSPEARQ8WU66 669 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 ZNF607Q96SK3 696 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 PTCH2Q9Y6C5 1203 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 MRPL42Q9Y6G3 142 aaKnown RBP17.47■□□□□ 0.39
SMPD4-202ENST00000409031 C17orf102A2RUQ5 167 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 SLITRK5O94991 958 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 DCDC1P59894 354 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 OGDHQ02218 1023 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 CPTPQ5TA50 214 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 KIAA0319LQ8IZA0 1049 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 ZNF614Q8N883 585 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 C1orf127Q8N9H9 656 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 ABHD11Q8NFV4 315 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 VPS51Q9UID3 782 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 FBXO9Q9UK97 447 aaPredicted RBP17.47■□□□□ 0.39
SMPD4-202ENST00000409031 CASTOR2A6NHX0 329 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 B4GALT5O43286 388 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 NPPAP01160 153 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 ELK4P28324 431 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 SLC1A2P43004 574 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 TXNL4AP83876 142 aaKnown RBP17.47■□□□□ 0.39
SMPD4-202ENST00000409031 HSPA14Q0VDF9 509 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 SNAPC2Q13487 334 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 ABHD15Q6UXT9 468 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 APOLD1Q96LR9 279 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 BBS4Q96RK4 519 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 SLC9A7Q96T83 725 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 PIGUQ9H490 435 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 MROH8Q9H579 483 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 AASSQ9UDR5 926 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 ZNF232Q9UNY5 417 aa17.47■□□□□ 0.39
SMPD4-202ENST00000409031 A0A0G2JPF8 293 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 ANKDD1BA6NHY2 528 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 HNRNPCL3B7ZW38 293 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 FPGTO14772 594 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 HNRNPCL4P0DMR1 293 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 GNA13Q14344 377 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 AKIRIN2Q53H80 203 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 ZNF516Q92618 1163 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 C1orf109Q9NX04 203 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 EIF3KQ9UBQ5 218 aaKnown RBP17.46■□□□□ 0.39
SMPD4-202ENST00000409031 RPS6KB2Q9UBS0 482 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 ABCG2Q9UNQ0 655 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 PCDHGB3Q9Y5G1 929 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 CAPN14A8MX76 684 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 EGFRP00533 1210 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 BMP2P12643 396 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 ETV4P43268 484 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 RHAGQ02094 409 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 PMS2P3Q13401 168 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 KCNA10Q16322 511 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.46■□□□□ 0.39
SMPD4-202ENST00000409031 CYS1Q717R9 158 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms