RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PLOD1Q02809 727 aaPredicted RBP17.38■□□□□ 0.37
CTNS-203ENST00000399306 GUCY2DQ02846 1103 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 ILF2Q12905 390 aaKnown RBP17.38■□□□□ 0.37
CTNS-203ENST00000399306 PDIA2Q13087 525 aaKnown RBP17.38■□□□□ 0.37
CTNS-203ENST00000399306 THOC5Q13769 683 aaKnown RBP17.38■□□□□ 0.37
CTNS-203ENST00000399306 KIR2DS5Q14953 304 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 CRTC3Q6UUV7 619 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 ABRAXAS1Q6UWZ7 409 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 KIAA0408Q6ZU52 694 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 CYS1Q717R9 158 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 GALNT7Q86SF2 657 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 CILP2Q8IUL8 1156 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 SLC35F3Q8IY50 421 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 BEND7Q8N7W2 519 aaPredicted RBP17.38■□□□□ 0.37
CTNS-203ENST00000399306 HM13Q8TCT9 377 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 ZDHHC1Q8WTX9 485 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 TSSK1BQ9BXA7 367 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 DPEP2Q9H4A9 486 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 CAAP1Q9H8G2 361 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 EPB41L5Q9HCM4 733 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 KLC4Q9NSK0 619 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 ZDHHC18Q9NUE0 388 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 SPATS2LQ9NUQ6 558 aaKnown RBP17.38■□□□□ 0.37
CTNS-203ENST00000399306 MARCH4Q9P2E8 410 aaPredicted RBP17.38■□□□□ 0.37
CTNS-203ENST00000399306 SLC23A2Q9UGH3 650 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 DMGDHQ9UI17 866 aaKnown RBP17.38■□□□□ 0.37
CTNS-203ENST00000399306 ACSL5Q9ULC5 683 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 APOBEC2Q9Y235 224 aaKnown RBP17.38■□□□□ 0.37
CTNS-203ENST00000399306 PRKAB1Q9Y478 270 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 U3KQA8 63 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 OR2AG2A6NM03 316 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 H3BMM5 538 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 NOBOXO60393 691 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 NDUFS3O75489 264 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 F3P13726 295 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 ACADVLP49748 655 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 DAB2P98082 770 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 RPA4Q13156 261 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 CUL1Q13616 776 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 HLTFQ14527 1009 aaKnown RBP eCLIP17.37■□□□□ 0.37
CTNS-203ENST00000399306 SEMA3AQ14563 771 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 C14orf28Q4W4Y0 310 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 METRNLQ641Q3 311 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 SLC30A9Q6PML9 568 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 UNC5AQ6ZN44 842 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 IGDCC3Q8IVU1 814 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 CNTN4Q8IWV2 1026 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 EIF1ADQ8N9N8 165 aaKnown RBP17.37■□□□□ 0.37
CTNS-203ENST00000399306 WDR83Q9BRX9 315 aaKnown RBP17.37■□□□□ 0.37
CTNS-203ENST00000399306 CCM2Q9BSQ5 444 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 P2RY12Q9H244 342 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 C20orf96Q9NUD7 363 aaPredicted RBP17.37■□□□□ 0.37
CTNS-203ENST00000399306 MTRF1LQ9UGC7 380 aaKnown RBP17.37■□□□□ 0.37
CTNS-203ENST00000399306 KCNK6Q9Y257 313 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 PLEKHM1Q9Y4G2 1056 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 PCDHB1Q9Y5F3 818 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 ASXL3Q9C0F0 2248 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 DCHS1Q96JQ0 3298 aa17.37■□□□□ 0.37
CTNS-203ENST00000399306 CACNA1AO00555 2505 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 DCDC2BA2VCK2 349 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 NUDT21O43809 227 aaKnown RBP17.36■□□□□ 0.37
CTNS-203ENST00000399306 TRIM16O95361 564 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 ESR1P03372 595 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 GLB1P16278 677 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 FASLGP48023 281 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 E2F1Q01094 437 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 ZNF658BQ4V348 819 aaPredicted RBP17.36■□□□□ 0.37
CTNS-203ENST00000399306 IYDQ6PHW0 289 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 KCNMB4Q86W47 210 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 RELL1Q8IUW5 271 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 NAGSQ8N159 534 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 SFRP1Q8N474 314 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 FBXO36Q8NEA4 188 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 WDR48Q8TAF3 677 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 PYROXD1Q8WU10 500 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 LPGAT1Q92604 370 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 CERS2Q96G23 380 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 PWWP2AQ96N64 755 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 PANX3Q96QZ0 392 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 PLAC1Q9HBJ0 212 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 GULP1Q9UBP9 304 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 TBC1D29Q9UFV1 150 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 GNPTGQ9UJJ9 305 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 PADI4Q9UM07 663 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 CHMP2BQ9UQN3 213 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 COMMD10Q9Y6G5 202 aa17.36■□□□□ 0.37
CTNS-203ENST00000399306 RP1P56715 2156 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 LIN7AO14910 233 aaPredicted RBP17.35■□□□□ 0.37
CTNS-203ENST00000399306 ZW10O43264 779 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 BANF1O75531 89 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 SPAG6O75602 509 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 SIM1P81133 766 aaPredicted RBP17.35■□□□□ 0.37
CTNS-203ENST00000399306 NR1D2Q14995 579 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 DET1Q7L5Y6 550 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 ZNF438Q7Z4V0 828 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 RBM12BQ8IXT5 1001 aaKnown RBP17.35■□□□□ 0.37
CTNS-203ENST00000399306 IFT20Q8IY31 132 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 ZBED8Q8IZ13 594 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 CLDN19Q8N6F1 224 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 KYQ8NBH2 561 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms