RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 GMIPQ9P107 970 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 ITM2BQ9Y287 266 aa15.81■□□□□ 0.12
CHMP1A-201ENST00000397901 IDH3BO43837 385 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 RFPL2O75678 378 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 GJB3O75712 270 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 ALX3O95076 343 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 SNAP29O95721 258 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 CRYZL1O95825 349 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 PEX11BO96011 259 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 HAPLN1P10915 354 aaPredicted RBP15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 FCGR1AP12314 374 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 BMP4P12644 408 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 COPZ1P61923 177 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 NFKB2Q00653 900 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 CACNB2Q08289 660 aaPredicted RBP15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 CCDC58Q4VC31 144 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 SIRPB2Q5JXA9 342 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 AFMIDQ63HM1 303 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 KANK2Q63ZY3 851 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 FAAH2Q6GMR7 532 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 C17orf99Q6UX52 265 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 RASAL3Q86YV0 1011 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 TMEM125Q96AQ2 219 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 TEX37Q96LM6 180 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 TMEM74Q96NL1 305 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 SEPHS2Q99611 448 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 ALG2Q9H553 416 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 ATP13A1Q9HD20 1204 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 SEMA4BQ9NPR2 832 aaPredicted RBP15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 POLE4Q9NR33 117 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 UXTQ9UBK9 157 aaPredicted RBP15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 PCDHA9Q9Y5H5 950 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 ZFC3H1O60293 1989 aaKnown RBP15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 CRCPO75575 148 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 ABCB1P08183 1280 aaPredicted RBP15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 MMP2P08253 660 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 SLC2A3P11169 496 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 CDH1P12830 882 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 FDXRP22570 491 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 ELK4P28324 431 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 SERPINB10P48595 397 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 PURAQ00577 322 aaKnown RBP15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 LIPEQ05469 1076 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 RBM48Q5RL73 367 aaKnown RBP15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 KCTD14Q9BQ13 255 aaPredicted RBP15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 KATNAL1Q9BW62 490 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 SDR39U1Q9NRG7 319 aaPredicted RBP15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 FAM105AQ9NUU6 356 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 TTC3P53804 2025 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 ANKRD12Q6UB98 2062 aa15.8■□□□□ 0.12
CHMP1A-201ENST00000397901 ISPDA4D126 451 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 MROH6A6NGR9 719 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 ARL5CA6NH57 179 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 TOR1BO14657 336 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 B4GAT1O43505 415 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 GSNP06396 782 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 PIRTP0C851 137 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 MTHFD2P13995 350 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 PRKCAP17252 672 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 RFC2P35250 354 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 TIAL1Q01085 375 aaKnown RBP eCLIP15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 POLD3Q15054 466 aaPredicted RBP15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 SKIV2LQ15477 1246 aaKnown RBP15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 MAPK11Q15759 364 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 FSCN1Q16658 493 aaKnown RBP15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 PAGE2BQ5JRK9 111 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 MARC1Q5VT66 337 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 BLOC1S3Q6QNY0 202 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 SCIMPQ6UWF3 145 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 LEMD2Q8NC56 503 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 OR10T2Q8NGX3 314 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 CHAC2Q8WUX2 184 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 AGO3Q9H9G7 860 aaKnown RBP15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 ABCC13Q9NSE7 274 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 SLAMF8Q9P0V8 285 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 ARL5AQ9Y689 179 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 C16orf96A6NNT2 1141 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 SUPT3HB4E1H0 165 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 KPNA6O60684 536 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 PAPSS2O95340 614 aaPredicted RBP15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 GOT2P00505 430 aaKnown RBP15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 GPIP06744 558 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 FGF4P08620 206 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 PRSS56P0CW18 603 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 RENBPP51606 427 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 SEMA3AQ14563 771 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 DGUOKQ16854 277 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 PAGE3Q5JUK9 113 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 PIK3R6Q5UE93 754 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 DCP1BQ8IZD4 617 aaKnown RBP15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 SPARTQ8N0X7 666 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 BLOC1S5Q8TDH9 187 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 EMILIN2Q9BXX0 1053 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 SMOC2Q9H3U7 446 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 SP110Q9HB58 689 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 NMUR1Q9HB89 426 aa15.79■□□□□ 0.12
CHMP1A-201ENST00000397901 TRPM7Q96QT4 1865 aa15.78■□□□□ 0.12
CHMP1A-201ENST00000397901 ASPDHA6ND91 283 aa15.78■□□□□ 0.12
CHMP1A-201ENST00000397901 MANSC4A6NHS7 340 aaPredicted RBP15.78■□□□□ 0.12
CHMP1A-201ENST00000397901 LDB2O43679 373 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms