RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 HOOK3Q86VS8 718 aa24.92■■□□□ 1.58
TSPAN4-207ENST00000397411 CFAP206Q8IYR0 622 aa24.92■■□□□ 1.58
TSPAN4-207ENST00000397411 MFSD3Q96ES6 412 aa24.92■■□□□ 1.58
TSPAN4-207ENST00000397411 CCM2Q9BSQ5 444 aa24.92■■□□□ 1.58
TSPAN4-207ENST00000397411 CDC23Q9UJX2 597 aa24.92■■□□□ 1.58
TSPAN4-207ENST00000397411 NCOR2Q9Y618 2525 aa24.92■■□□□ 1.58
TSPAN4-207ENST00000397411 IGLV3-16A0A075B6K0 115 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 FAM221BA6H8Z2 402 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 QSOX1O00391 747 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 PPM1DO15297 605 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 AP2A2O94973 939 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 VIPP01282 170 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 POLBP06746 335 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 GPR3P46089 330 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 OR1D5P58170 312 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 NFE2L1Q14494 772 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 AMZ1Q400G9 498 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 DNAJC21Q5F1R6 531 aaKnown RBP24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 CLDN19Q8N6F1 224 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 OR2L2Q8NH16 312 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 CXorf40BQ96DE9 158 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 CCDC97Q96F63 343 aaPredicted RBP24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 SNF8Q96H20 258 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 SGSM3Q96HU1 749 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 ZMYND15Q9H091 742 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 KCNK4Q9NYG8 393 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 CPNE7Q9UBL6 633 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 ACSL5Q9ULC5 683 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 PSMD13Q9UNM6 376 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 UNC13CQ8NB66 2214 aa24.91■■□□□ 1.58
TSPAN4-207ENST00000397411 FAM187AA6NFU0 413 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 SMAPO00193 183 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 NDC80O14777 642 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 CSO75390 466 aaKnown RBP24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 TCEA3O75764 348 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 OR56A5P0C7T3 313 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 TTPAP49638 278 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 PRLHRP49683 370 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 DMPKQ09013 629 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 MORF4L2Q15014 288 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 AGAP9Q5VTM2 703 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 CDCP2Q5VXM1 449 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 ABRAXAS1Q6UWZ7 409 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 WASH2PQ6VEQ5 465 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 SPRED1Q7Z699 444 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 CACTIN-AS1Q8N1I8 211 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 ZNF669Q96BR6 464 aaPredicted RBP24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 AHCYL2Q96HN2 611 aaKnown RBP24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 LINC00615Q96LM1 132 aaPredicted RBP24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 SARS2Q9NP81 518 aaKnown RBP24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 WASH6PQ9NQA3 447 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 RPS6KL1Q9Y6S9 549 aa24.9■■□□□ 1.58
TSPAN4-207ENST00000397411 FAM237BA0A1B0GVD1 139 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 A6NCN8 305 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 PFDN6O15212 129 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 B4GAT1O43505 415 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 NDUFS3O75489 264 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 XRCC1P18887 633 aaPredicted RBP24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 IVDP26440 423 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 FASLGP48023 281 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 MRPS25P82663 173 aaKnown RBP24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 ANKRD20A4Q4UJ75 823 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 METRNLQ641Q3 311 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 MRNIPQ6NTE8 343 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 FAM83HQ6ZRV2 1179 aaPredicted RBP24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 LDB1Q86U70 411 aaPredicted RBP24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 ZNF761Q86XN6 746 aaPredicted RBP24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 DCBLD1Q8N8Z6 715 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 BBOF1Q8ND07 529 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 HM13Q8TCT9 377 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 STAMBPL1Q96FJ0 436 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 SCHIP1Q9P0W5 487 aaPredicted RBP24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 SNX24Q9Y343 169 aa24.89■■□□□ 1.58
TSPAN4-207ENST00000397411 PIKFYVEQ9Y2I7 2098 aa24.89■■□□□ 1.57
TSPAN4-207ENST00000397411 SGTAO43765 313 aa24.88■■□□□ 1.57
TSPAN4-207ENST00000397411 FTH1P02794 183 aa24.88■■□□□ 1.57
TSPAN4-207ENST00000397411 ITGA8P53708 1063 aa24.88■■□□□ 1.57
TSPAN4-207ENST00000397411 THOC5Q13769 683 aaKnown RBP24.88■■□□□ 1.57
TSPAN4-207ENST00000397411 BBS9Q3SYG4 887 aa24.88■■□□□ 1.57
TSPAN4-207ENST00000397411 KIAA0930Q6ICG6 404 aaPredicted RBP24.88■■□□□ 1.57
TSPAN4-207ENST00000397411 PACS1Q6VY07 963 aa24.88■■□□□ 1.57
TSPAN4-207ENST00000397411 USP53Q70EK8 1073 aa24.88■■□□□ 1.57
TSPAN4-207ENST00000397411 ZNF438Q7Z4V0 828 aa24.88■■□□□ 1.57
TSPAN4-207ENST00000397411 PDIK1LQ8N165 341 aa24.88■■□□□ 1.57
TSPAN4-207ENST00000397411 SIGLEC10Q96LC7 697 aa24.88■■□□□ 1.57
TSPAN4-207ENST00000397411 TSSK1BQ9BXA7 367 aa24.88■■□□□ 1.57
TSPAN4-207ENST00000397411 ATXN7L1Q9ULK2 861 aaPredicted RBP24.88■■□□□ 1.57
TSPAN4-207ENST00000397411 C17orf113A0A1B0GUU1 675 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 A0A1W2PQM1 296 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 GOLGA8KD6RF30 607 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 GOLGA8TH3BQL2 631 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 OR1I1O60431 355 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 GSTM1P09488 218 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 SLC35G4P0C7Q5 338 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 SLC19A1P41440 591 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 GSTM4Q03013 218 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 SEMA3AQ14563 771 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 WHAMMP3Q1A5X7 153 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 MAP9Q49MG5 647 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms