RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 COMMD3Q9UBI1 195 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 COPS7AQ9UBW8 275 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 GABBR2O75899 941 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 TM7SF2O76062 418 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 CAND1Q86VP6 1230 aaKnown RBP13.29□□□□□ -0.28
USP49-203ENST00000394253 ATAD1Q8NBU5 361 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 HEXDCQ8WVB3 486 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 FUZQ9BT04 418 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 NACAE9PAV3 2078 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 A0A0A0MRY4 1105 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 DUSP4Q13115 394 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 SPATA13Q96N96 652 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 OR14A2Q96R54 314 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 C11orf16Q9NQ32 467 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 ARAP3Q8WWN8 1544 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 KCNQ3O43525 872 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 LRATO95237 230 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 PUM1Q14671 1186 aaKnown RBP eCLIP13.29□□□□□ -0.28
USP49-203ENST00000394253 KRBOX4Q5JUW0 171 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 PGAM4Q8N0Y7 254 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 CCDC120Q96HB5 630 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 PCDHB16Q9NRJ7 776 aa13.29□□□□□ -0.28
USP49-203ENST00000394253 AZIN1O14977 448 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 SGPL1O95470 568 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 ELAVL2Q12926 359 aaKnown RBP13.28□□□□□ -0.28
USP49-203ENST00000394253 TLR1Q15399 786 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 ARSJQ5FYB0 599 aaPredicted RBP13.28□□□□□ -0.28
USP49-203ENST00000394253 ZNF280DQ6N043 979 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 ASB18Q6ZVZ8 466 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 STK35Q8TDR2 534 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 ROPN1LQ96C74 230 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 POLR3HQ9Y535 204 aaPredicted RBP13.28□□□□□ -0.28
USP49-203ENST00000394253 SLC12A8A0AV02 714 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 ZNF99A8MXY4 864 aaPredicted RBP13.28□□□□□ -0.28
USP49-203ENST00000394253 UGT2B10P36537 528 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 KIR3DL1P43629 444 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 GABRB2P47870 512 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 PPP5CP53041 499 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 CRISP1P54107 249 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 HERV-K104P61576 105 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 DEFA6Q01524 100 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 ZNF574Q6ZN55 896 aaPredicted RBP13.28□□□□□ -0.28
USP49-203ENST00000394253 ATP6V1C2Q8NEY4 427 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 SLC38A4Q969I6 547 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 OMDQ99983 421 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 AURKAO14965 403 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 ZMPSTE24O75844 475 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 ZNF45Q02386 682 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 STYK1Q6J9G0 422 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 OR2AJ1Q8NGZ0 328 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 DCAKDQ8WVC6 231 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 TCF25Q9BQ70 676 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 ZNF878C9JN71 531 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 MAD2L1BPQ15013 274 aaPredicted RBP13.28□□□□□ -0.28
USP49-203ENST00000394253 SLC41A1Q8IVJ1 513 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 UBE2J2Q8N2K1 259 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 BEND7Q8N7W2 519 aaPredicted RBP13.28□□□□□ -0.28
USP49-203ENST00000394253 SPATA20Q8TB22 786 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 DENND2DQ9H6A0 471 aaPredicted RBP13.28□□□□□ -0.28
USP49-203ENST00000394253 TLR6Q9Y2C9 796 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 H7C417 338 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 TP73O15350 636 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 RENP00797 406 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 CEBPAP49715 358 aaPredicted RBP13.28□□□□□ -0.28
USP49-203ENST00000394253 TFAP2DQ7Z6R9 452 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 RELL1Q8IUW5 271 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 NINJ1Q92982 152 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 MAP3K14Q99558 947 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 ACTR6Q9GZN1 396 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 CALML5Q9NZT1 146 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 ERVK-19Q9WJR5 959 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 PLATP00750 562 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 LINC00032P0C843 101 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 EPHA3P29320 983 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 TKTL1P51854 596 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 MTMR2Q13614 643 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 TOR1AIP1Q5JTV8 583 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 ADGRD2Q7Z7M1 963 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 KCTD5Q9NXV2 234 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 PCYOX1Q9UHG3 505 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 MDC1Q14676 2089 aaKnown RBP13.28□□□□□ -0.28
USP49-203ENST00000394253 HSPA14Q0VDF9 509 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 PSTKQ8IV42 348 aaKnown RBP13.28□□□□□ -0.28
USP49-203ENST00000394253 SAMD9LQ8IVG5 1584 aa13.28□□□□□ -0.28
USP49-203ENST00000394253 C17orf102A2RUQ5 167 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 CAPN8A6NHC0 703 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 PPP1R3GB7ZBB8 358 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 SCAF4O95104 1147 aaKnown RBP13.27□□□□□ -0.28
USP49-203ENST00000394253 NR2C1P13056 603 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 HSD11B1P28845 292 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 PTPN11Q06124 597 aaPredicted RBP13.27□□□□□ -0.28
USP49-203ENST00000394253 TMED4Q7Z7H5 227 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 RNF180Q86T96 592 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 ARL14Q8N4G2 192 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 IFT27Q9BW83 186 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 ZNF358Q9NW07 568 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 HCN3Q9P1Z3 774 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 CCDC163A0A0D9SF12 145 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 C19orf81C9J6K1 198 aa13.27□□□□□ -0.28
USP49-203ENST00000394253 PUS10Q3MIT2 529 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms