RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 TTC25Q96NG3 672 aa16.27■□□□□ 0.19
PTPRK-208ENST00000392449 OR6C1Q96RD1 312 aa16.27■□□□□ 0.19
PTPRK-208ENST00000392449 ULBP3Q9BZM4 244 aa16.27■□□□□ 0.19
PTPRK-208ENST00000392449 GBA3Q9H227 469 aa16.27■□□□□ 0.19
PTPRK-208ENST00000392449 FAM8A1Q9UBU6 413 aa16.27■□□□□ 0.19
PTPRK-208ENST00000392449 CFAP20Q9Y6A4 193 aaKnown RBP16.27■□□□□ 0.19
PTPRK-208ENST00000392449 ZNF891A8MT65 544 aaPredicted RBP16.26■□□□□ 0.19
PTPRK-208ENST00000392449 HACD1B0YJ81 288 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 APOC4-APOC2K7ER74 178 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 APOC2P02655 101 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 F8A1P23610 371 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 MAP4P27816 1152 aaKnown RBP16.26■□□□□ 0.19
PTPRK-208ENST00000392449 OAS2P29728 719 aaKnown RBP16.26■□□□□ 0.19
PTPRK-208ENST00000392449 OTUD4Q01804 1114 aaKnown RBP16.26■□□□□ 0.19
PTPRK-208ENST00000392449 SPA17Q15506 151 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 FNBP1LQ5T0N5 605 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 CCDC181Q5TID7 509 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 DUS1LQ6P1R4 473 aaKnown RBP16.26■□□□□ 0.19
PTPRK-208ENST00000392449 TMEM220Q6QAJ8 160 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 WASH2PQ6VEQ5 465 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 AMZ2Q86W34 360 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 DDHD1Q8NEL9 900 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 ACTL9Q8TC94 416 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 SLC45A3Q96JT2 553 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 VAT1Q99536 393 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 ZNF768Q9H5H4 540 aaKnown RBP16.26■□□□□ 0.19
PTPRK-208ENST00000392449 WASH6PQ9NQA3 447 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 GEMIN8Q9NWZ8 242 aaKnown RBP16.26■□□□□ 0.19
PTPRK-208ENST00000392449 HACD3Q9P035 362 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTPRK-208ENST00000392449 REXO2Q9Y3B8 237 aaKnown RBP16.26■□□□□ 0.19
PTPRK-208ENST00000392449 PKP3Q9Y446 797 aa16.26■□□□□ 0.19
PTPRK-208ENST00000392449 PRAMEF1O95521 474 aa16.25■□□□□ 0.19
PTPRK-208ENST00000392449 VCLP18206 1134 aa16.25■□□□□ 0.19
PTPRK-208ENST00000392449 PSMB4P28070 264 aa16.25■□□□□ 0.19
PTPRK-208ENST00000392449 AKT1P31749 480 aa16.25■□□□□ 0.19
PTPRK-208ENST00000392449 CTNNA1P35221 906 aaKnown RBP16.25■□□□□ 0.19
PTPRK-208ENST00000392449 KCNAB1Q14722 419 aa16.25■□□□□ 0.19
PTPRK-208ENST00000392449 RPE65Q16518 533 aa16.25■□□□□ 0.19
PTPRK-208ENST00000392449 CACHD1Q5VU97 1274 aa16.25■□□□□ 0.19
PTPRK-208ENST00000392449 PTRH1Q86Y79 214 aaKnown RBP16.25■□□□□ 0.19
PTPRK-208ENST00000392449 GALNT6Q8NCL4 622 aa16.25■□□□□ 0.19
PTPRK-208ENST00000392449 BRSK1Q8TDC3 778 aa16.25■□□□□ 0.19
PTPRK-208ENST00000392449 KIAA1143Q96AT1 154 aaPredicted RBP16.25■□□□□ 0.19
PTPRK-208ENST00000392449 ZPBPQ9BS86 351 aa16.25■□□□□ 0.19
PTPRK-208ENST00000392449 FKBPLQ9UIM3 349 aa16.25■□□□□ 0.19
PTPRK-208ENST00000392449 TRHDEQ9UKU6 1024 aa16.25■□□□□ 0.19
PTPRK-208ENST00000392449 CCL22O00626 93 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 STX7O15400 261 aaKnown RBP16.24■□□□□ 0.19
PTPRK-208ENST00000392449 PPFIA2O75334 1257 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 STAT5AP42229 794 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 HALP42357 657 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 ABHD18Q0P651 414 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 CDC20Q12834 499 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 LDLRAP1Q5SW96 308 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 C16orf46Q6P387 395 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 XKR5Q6UX68 686 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 CERS6Q6ZMG9 384 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 CCDC170Q8IYT3 715 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 OR4K2Q8NGD2 314 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 CCDC110Q8TBZ0 833 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 STARD8Q92502 1023 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 ALG3Q92685 438 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 ZCCHC2Q9C0B9 1178 aaKnown RBP16.24■□□□□ 0.19
PTPRK-208ENST00000392449 LACRTQ9GZZ8 138 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 SLC25A18Q9H1K4 315 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 IMP3Q9NV31 184 aaKnown RBP16.24■□□□□ 0.19
PTPRK-208ENST00000392449 RPS6KL1Q9Y6S9 549 aa16.24■□□□□ 0.19
PTPRK-208ENST00000392449 IGHV5-51A0A0C4DH38 117 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 KCNN4O15554 427 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 PJA2O43164 708 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 SUV39H1O43463 412 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 KIAA0754O94854 1291 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 NDUFA10O95299 355 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 TIAF1O95411 115 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 ADRA1AP35348 466 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 CYLC1P35663 651 aaPredicted RBP16.23■□□□□ 0.19
PTPRK-208ENST00000392449 GEMP55040 296 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 EIF3EP60228 445 aaKnown RBP16.23■□□□□ 0.19
PTPRK-208ENST00000392449 TMPRSS15P98073 1019 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 DMPKQ09013 629 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 KCNAB2Q13303 367 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 XRCC4Q13426 336 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 ITGA9Q13797 1035 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 SPARCL1Q14515 664 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 DEFB109BQ30KR1 87 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 ANKRD20A2Q5SQ80 823 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 ANKRD20A1Q5TYW2 823 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 ANKRD20A3Q5VUR7 823 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 ZDHHC20Q5W0Z9 365 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 RAD9BQ6WBX8 426 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 PRSS42Q7Z5A4 293 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 RASGRP3Q8IV61 690 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 LILRA3Q8N6C8 439 aaPredicted RBP16.23■□□□□ 0.19
PTPRK-208ENST00000392449 ACRBPQ8NEB7 543 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 ZNF398Q8TD17 642 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 OSBPL8Q9BZF1 889 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 WWP1Q9H0M0 922 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 FAM96AQ9H5X1 160 aa16.23■□□□□ 0.19
PTPRK-208ENST00000392449 CLMPQ9H6B4 373 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms