RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ZNF678Q5SXM1 525 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 ZNF597Q96LX8 424 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 TMEM209Q96SK2 561 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 TOR4AQ9NXH8 423 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 CDC7O00311 574 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 NME4O00746 187 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 SCELO95171 688 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 ATE1O95260 518 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 TSPAN19P0C672 248 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 SCNN1AP37088 669 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 CTSKP43235 329 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 TXNL4AP83876 142 aaKnown RBP13□□□□□ -0.33
TRAPPC9-201ENST00000389328 GRM2Q14416 872 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 TAF1CQ15572 869 aaPredicted RBP13□□□□□ -0.33
TRAPPC9-201ENST00000389328 IFNLR1Q8IU57 520 aaPredicted RBP13□□□□□ -0.33
TRAPPC9-201ENST00000389328 LIX1Q8N485 282 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 PPTC7Q8NI37 304 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 CYP2S1Q96SQ9 504 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 PARK7Q99497 189 aaKnown RBP13□□□□□ -0.33
TRAPPC9-201ENST00000389328 NAV1Q8NEY1 1877 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 LOC100130705A0A1B0GUX0 176 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 NBNO60934 754 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 RASAL1O95294 804 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 TYMPP19971 482 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 TMBIM6P55061 237 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 FAM171A1Q5VUB5 890 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 THOC7Q6I9Y2 204 aaKnown RBP12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 CYP20A1Q6UW02 462 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 C2orf69Q8N8R5 385 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 RTL3Q8N8U3 475 aaKnown RBP12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 COPS4Q9BT78 406 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 DCSTAMPQ9H295 470 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 SNX6Q9UNH7 406 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 PCDHGC4Q9Y5F7 938 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 HMX2A2RU54 273 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 PDHXO00330 501 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 PRRG1O14668 218 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 SUV39H1O43463 412 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 TLR5O60602 858 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 ECI2O75521 394 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 DIRAS1O95057 198 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 SMIM18P0DKX4 95 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 ARSAP15289 507 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 HLCSP50747 726 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 KCNAB2Q13303 367 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 PYDC2Q56P42 97 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 TECRLQ5HYJ1 363 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 ARMC12Q5T9G4 340 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 NANOGP8Q6NSW7 305 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 GPR156Q8NFN8 814 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 OR6K2Q8NGY2 324 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 OR5K1Q8NHB7 308 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 KCNS3Q9BQ31 491 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 NANOGQ9H9S0 305 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 MIEF1Q9NQG6 463 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 GMIPQ9P107 970 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 ERGIC3Q9Y282 383 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 SLC27A5Q9Y2P5 690 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 PLCH1Q4KWH8 1693 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 IFRD1O00458 451 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 ALDH9A1P49189 494 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 DNAJB13P59910 316 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 TP53BP2Q13625 1128 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 HIST2H2ACQ16777 129 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 HIST2H2AA3Q6FI13 130 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 ZNF534Q76KX8 674 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 ARMC8Q8IUR7 673 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 NAA50Q9GZZ1 169 aaKnown RBP12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 ADAMTS10Q9H324 1103 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 ST3GAL5Q9UNP4 418 aa12.99□□□□□ -0.33
TRAPPC9-201ENST00000389328 A0A1B0GTW7 788 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 KRT87PA6NCN2 255 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 ZNF487B1APH4 448 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 NDST3O95803 873 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 CYP11A1P05108 521 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 BMP2P12643 396 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 GPR15P49685 360 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 ELP6Q0PNE2 266 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 STARD3Q14849 445 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 EIF3MQ7L2H7 374 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 OSTM1Q86WC4 334 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 C2CD4AQ8NCU7 369 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 GTF3C2Q8WUA4 911 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 PHF10Q8WUB8 498 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 NELL1Q92832 810 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 ADAM2Q99965 735 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 VPS51Q9UID3 782 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 LSM7Q9UK45 103 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 ANKRD33BA6NCL7 494 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 PLOD2O00469 737 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 NIPSNAP2O75323 286 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 CDK14O94921 469 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 MBL2P11226 248 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 POU2F1P14859 743 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 MYF6P23409 242 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 GPC1P35052 558 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 RFC2P35250 354 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 IST1P53990 364 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 PRR23BQ6ZRT6 265 aa12.98□□□□□ -0.33
TRAPPC9-201ENST00000389328 DEPDC4Q8N2C3 294 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms