RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 NTN4Q9HB63 628 aa0.33□□□□□ -2.36
RNU6-880P-201ENST00000384526 KRT84Q9NSB2 600 aa0.33□□□□□ -2.36
RNU6-880P-201ENST00000384526 NDE1Q9NXR1 346 aa0.33□□□□□ -2.36
RNU6-880P-201ENST00000384526 FLRT3Q9NZU0 649 aa0.33□□□□□ -2.36
RNU6-880P-201ENST00000384526 ZNF69Q9UC07 566 aa0.33□□□□□ -2.36
RNU6-880P-201ENST00000384526 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
RNU6-880P-201ENST00000384526 ANKRD17O75179 2603 aaKnown RBP0.33□□□□□ -2.36
RNU6-880P-201ENST00000384526 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 OR6C76A6NM76 312 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 ANKRD28O15084 1053 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 ATP6V0E1O15342 81 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 BUD23O43709 281 aaKnown RBP0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 MAGEC1O60732 1142 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 PLA2G6O60733 806 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 ACTL6BO94805 426 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 LEPRP48357 1165 aaKnown RBP0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 PAX9P55771 341 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 IGLV3-21P80748 117 aaPredicted RBP0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 MFAP5Q13361 173 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 EBI3Q14213 229 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 RAB6CQ53S08 254 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 Q6P435 159 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 QSOX2Q6ZRP7 698 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 SUGP1Q8IWZ8 645 aaKnown RBP0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 NGEFQ8N5V2 710 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 RTL3Q8N8U3 475 aaKnown RBP0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 LINS1Q8NG48 757 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 SCAMP5Q8TAC9 235 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 ATP8B4Q8TF62 1192 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 RAB40AQ8WXH6 277 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 BRI3BPQ8WY22 251 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 C3orf49Q96BT1 292 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 RAB6CQ9H0N0 254 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 PCDH12Q9NPG4 1184 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 GRID1Q9ULK0 1009 aa0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 LSM4Q9Y4Z0 139 aaKnown RBP0.32□□□□□ -2.36
RNU6-880P-201ENST00000384526 TRIM49BA6NDI0 452 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 TNFSF4P23510 183 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 RBMXP38159 391 aaKnown RBP0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 SOX3P41225 446 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 ZNF133P52736 654 aaPredicted RBP0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 CKAP4Q07065 602 aaKnown RBP0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 GOLGA8FQ08AF8 430 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 RUNX3Q13761 415 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 FAM209BQ5JX69 171 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 UTF1Q5T230 341 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 ATAD3CQ5T2N8 411 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 NDUFAF5Q5TEU4 345 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 KRT39Q6A163 491 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 NXNQ6DKJ4 435 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 PAPD4Q6PIY7 484 aaKnown RBP0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 KIF6Q6ZMV9 814 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 PQLC2Q6ZP29 291 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 RINLQ6ZS11 566 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 SYT13Q7L8C5 426 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 FAM160B2Q86V87 743 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 PIGZQ86VD9 579 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 C2CD5Q86YS7 1000 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 KLHDC1Q8N7A1 406 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 OLIG1Q8TAK6 271 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 SMAP2Q8WU79 429 aaPredicted RBP0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 MUL1Q969V5 352 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 BBS4Q96RK4 519 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 FAM110AQ9BQ89 295 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 TUBB1Q9H4B7 451 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 BPIFA1Q9NP55 256 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 ZNF275Q9NSD4 429 aaPredicted RBP0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 IL17BQ9UHF5 180 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 NAALAD2Q9Y3Q0 740 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 FSIP2Q5CZC0 6907 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 ITGB4P16144 1822 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 NACAE9PAV3 2078 aa0.31□□□□□ -2.36
RNU6-880P-201ENST00000384526 TEX13DA0A0J9YY54 714 aaPredicted RBP0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 VSTM5A8MXK1 200 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 HS3ST1O14792 307 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 PER2O15055 1255 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 SCGB1D2O95969 90 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 MT-CYBP00156 380 aaPredicted RBP0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 UGT1A1P22309 533 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 OXTRP30559 389 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 SERPINF1P36955 418 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 LMAN1P49257 510 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 CDH11P55287 796 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 SMAD1Q15797 465 aaKnown RBP0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 Q1RN00 199 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 SERTAD4-AS1Q5TG53 156 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 LIN54Q6MZP7 749 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 RRAGAQ7L523 313 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 GPAT4Q86UL3 456 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 CATSPERDQ86XM0 798 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 FMNL3Q8IVF7 1028 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 DHX40Q8IX18 779 aaKnown RBP0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 LYPD1Q8N2G4 141 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 NUP37Q8NFH4 326 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 MYRIPQ8NFW9 859 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 FAM71BQ8TC56 605 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 NPRL2Q8WTW4 380 aa0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 PHF10Q8WUB8 498 aaKnown RBP0.3□□□□□ -2.36
RNU6-880P-201ENST00000384526 KIAA1191Q96A73 305 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms