RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 MMP27Q9H306 513 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 TRIM39Q9HCM9 518 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 PCDHB14Q9Y5E9 798 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 U3KQV3 271 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 SCN1AP35498 2009 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 ERVH48-1M5A8F1 160 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 HAT1O14929 419 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 SLC22A3O75751 556 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 LCKP06239 509 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 CYP2C18P33260 490 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 RYKP34925 604 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 FCGRTP55899 365 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 SMN1Q16637 294 aaKnown RBP14.82□□□□□ -0.04
CTNS-202ENST00000381870 TPRG1LQ5T0D9 272 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 GALNT5Q7Z7M9 940 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 HID1Q8IV36 788 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 REPS2Q8NFH8 660 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 ZFYVE19Q96K21 471 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 CLPBQ9H078 707 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 TREX1Q9NSU2 369 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 COMMD8Q9NX08 183 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 PAQR5Q9NXK6 330 aaPredicted RBP14.82□□□□□ -0.04
CTNS-202ENST00000381870 MYLKQ15746 1914 aa14.82□□□□□ -0.04
CTNS-202ENST00000381870 CENPXA8MT69 81 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 PRKD3O94806 890 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 DBTP11182 482 aaKnown RBP14.81□□□□□ -0.04
CTNS-202ENST00000381870 CYP4B1P13584 511 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 PFKLP17858 780 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 IFNA8P32881 189 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 SCNN1AP37088 669 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 NDUFV1P49821 464 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 PFKFB4Q16877 469 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 NOMO2Q5JPE7 1267 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 ZNF544Q6NX49 715 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 PNCKQ6P2M8 343 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 TUBA3EQ6PEY2 450 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 ARHGAP36Q6ZRI8 547 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 HFE2Q6ZVN8 426 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 SPERTQ8NA61 448 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 FBLIM1Q8WUP2 373 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 ZNF419Q96HQ0 510 aaPredicted RBP14.81□□□□□ -0.04
CTNS-202ENST00000381870 NPY6RQ99463 290 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 DUSP21Q9H596 190 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 ACOT13Q9NPJ3 140 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 RNF19AQ9NV58 838 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 AIG1Q9NVV5 245 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 POLR3BQ9NW08 1133 aaPredicted RBP14.81□□□□□ -0.04
CTNS-202ENST00000381870 TMEFF2Q9UIK5 374 aaPredicted RBP14.81□□□□□ -0.04
CTNS-202ENST00000381870 C3orf18Q9UK00 162 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 ZNF214Q9UL59 606 aaPredicted RBP14.81□□□□□ -0.04
CTNS-202ENST00000381870 SNX6Q9UNH7 406 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 MN1Q10571 1320 aaPredicted RBP14.81□□□□□ -0.04
CTNS-202ENST00000381870 IGKV6-21A0A0C4DH24 114 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 TYW5A2RUC4 315 aaKnown RBP14.81□□□□□ -0.04
CTNS-202ENST00000381870 NCAM2O15394 837 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 ZW10O43264 779 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 MTSS1O43312 755 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 PGLSO95336 258 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 GGT1P19440 569 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 LMO2P25791 158 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 ICAM3P32942 547 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 ADRA1BP35368 520 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 CLK1P49759 484 aaKnown RBP14.81□□□□□ -0.04
CTNS-202ENST00000381870 SIM2Q14190 667 aaPredicted RBP14.81□□□□□ -0.04
CTNS-202ENST00000381870 TMEM132BQ14DG7 1078 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 SYT16Q17RD7 645 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 CADM2Q8N3J6 435 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 SLC2A14Q8TDB8 520 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 TSPEARQ8WU66 669 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 ST6GAL2Q96JF0 529 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 CYP2S1Q96SQ9 504 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 ANKHQ9HCJ1 492 aa14.81□□□□□ -0.04
CTNS-202ENST00000381870 EVPLLA8MZ36 301 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 CYP11A1P05108 521 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 UBL4AP11441 157 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 FMO4P31512 558 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 UBQLNLQ8IYU4 475 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 MICU2Q8IYU8 434 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 SIMC1Q8NDZ2 872 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 GIMAP4Q9NUV9 329 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 SMPD4Q9NXE4 827 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 LIMD1Q9UGP4 676 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 PGAP2Q9UHJ9 254 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 AGO1Q9UL18 857 aaKnown RBP14.8□□□□□ -0.04
CTNS-202ENST00000381870 PARP14Q460N5 1801 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 PMPCBO75439 489 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 CD4P01730 458 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 DCTP40126 519 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 RPL34P49207 117 aaKnown RBP14.8□□□□□ -0.04
CTNS-202ENST00000381870 SEMA3BQ13214 749 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 FAM214AQ32MH5 1076 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 Q5BKY6 102 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 DLEU7Q6UYE1 221 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 BNIPLQ7Z465 357 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 FAM20CQ8IXL6 584 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 SVOPLQ8N434 492 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 ZNF540Q8NDQ6 660 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 DPF3Q92784 378 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 NT5C3BQ969T7 300 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 SLC47A1Q96FL8 570 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms