RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 GLYATQ6IB77 296 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 RNF180Q86T96 592 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 ISG20Q96AZ6 181 aaKnown RBP24.98■■□□□ 1.59
C9orf40-201ENST00000376854 NSMCE2Q96MF7 247 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 ADGRE3Q9BY15 652 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 ZNF639Q9UID6 485 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 SLC38A8A6NNN8 435 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 ANKRD66B4E2M5 251 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 PYCR3Q53H96 274 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 DHRS4L2Q6PKH6 230 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 IL27RAQ6UWB1 636 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 TAS2R42Q7RTR8 314 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 DENND1CQ8IV53 801 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 LRRC43Q8N309 656 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 DPP10Q8N608 796 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 METTL6Q8TCB7 284 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 BDH2Q9BUT1 245 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 CXorf21Q9HAI6 301 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 ABT1Q9ULW3 272 aaKnown RBP24.98■■□□□ 1.59
C9orf40-201ENST00000376854 GREB1Q4ZG55 1949 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 CROCCQ5TZA2 2017 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 A0A0U1RQS6 177 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 IQCF5A8MTL0 148 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 CAPN1P07384 714 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 GALK1P51570 392 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 PMS2P3Q13401 168 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 PPM1MQ96MI6 270 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 RETREG1Q9H6L5 497 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 HEBP1Q9NRV9 189 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 NUDT4Q9NZJ9 180 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 MAGEL2Q9UJ55 1249 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 PCDHB3Q9Y5E6 796 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 ZFC3H1O60293 1989 aaKnown RBP24.97■■□□□ 1.59
C9orf40-201ENST00000376854 GBF1Q92538 1859 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 CLDN11O75508 207 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 F11P03951 625 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 HTR6P50406 440 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 TBPL2Q6SJ96 375 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 DLEU7Q6UYE1 221 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 BPIFB1Q8TDL5 484 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 HBEGFQ99075 208 aa24.97■■□□□ 1.59
C9orf40-201ENST00000376854 GRXCR2A6NFK2 248 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 G6PDP11413 515 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 PTGER3P43115 390 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 STT3AP46977 705 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 SGSHP51688 502 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 PLCL1Q15111 1095 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 C18orf21Q32NC0 220 aaPredicted RBP24.96■■□□□ 1.59
C9orf40-201ENST00000376854 AARS2Q5JTZ9 985 aaKnown RBP24.96■■□□□ 1.59
C9orf40-201ENST00000376854 USP51Q70EK9 711 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 FRA10AC1Q70Z53 315 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 HIPK3Q9H422 1215 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 PKD2L2Q9NZM6 624 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 TSR3Q9UJK0 312 aaKnown RBP24.96■■□□□ 1.59
C9orf40-201ENST00000376854 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.96■■□□□ 1.59
C9orf40-201ENST00000376854 ILVBLA1L0T0 632 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 ESR1P03372 595 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 CDH1P12830 882 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 ATF6P18850 670 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 ZNF177Q13360 481 aaPredicted RBP24.96■■□□□ 1.59
C9orf40-201ENST00000376854 GLT1D1Q96MS3 346 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 DCUN1D5Q9BTE7 237 aa24.96■■□□□ 1.59
C9orf40-201ENST00000376854 NT5C1B-RDH14C9J2C7 533 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 GPR39O43194 453 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 PFDN1O60925 122 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 GJB5O95377 273 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 CLCN7P51798 805 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 MTPNP58546 118 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 ADARB1P78563 741 aaKnown RBP24.95■■□□□ 1.58
C9orf40-201ENST00000376854 TRAF2Q12933 501 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 SELPLGQ14242 412 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 NR6A1Q15406 480 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 OTUD3Q5T2D3 398 aaPredicted RBP24.95■■□□□ 1.58
C9orf40-201ENST00000376854 CYP20A1Q6UW02 462 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 PRR23BQ6ZRT6 265 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 LYSMD3Q7Z3D4 306 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 RIMKLAQ8IXN7 391 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 ABI1Q8IZP0 508 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 TTC30BQ8N4P2 665 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 CDK5RAP1Q96SZ6 601 aaKnown RBP24.95■■□□□ 1.58
C9orf40-201ENST00000376854 POLR1BQ9H9Y6 1135 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 MARCH5Q9NX47 278 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 COMMD10Q9Y6G5 202 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 CHD5Q8TDI0 1954 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 RAB39AQ14964 217 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 RTP2Q5QGT7 225 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 GOLGA7Q7Z5G4 137 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 DTWD1Q8N5C7 304 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 OSBPL6Q9BZF3 934 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 ACTL8Q9H568 366 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 ST14Q9Y5Y6 855 aa24.95■■□□□ 1.58
C9orf40-201ENST00000376854 LSM1O15116 133 aaKnown RBP24.94■■□□□ 1.58
C9orf40-201ENST00000376854 TTKP33981 857 aa24.94■■□□□ 1.58
C9orf40-201ENST00000376854 PCBP2Q15366 365 aaKnown RBP eCLIP24.94■■□□□ 1.58
C9orf40-201ENST00000376854 TMEM214Q6NUQ4 689 aaKnown RBP24.94■■□□□ 1.58
C9orf40-201ENST00000376854 FAM126BQ8IXS8 530 aa24.94■■□□□ 1.58
C9orf40-201ENST00000376854 RNF217Q8TC41 542 aa24.94■■□□□ 1.58
C9orf40-201ENST00000376854 NUDT8Q8WV74 236 aa24.94■■□□□ 1.58
C9orf40-201ENST00000376854 CGREF1Q99674 301 aa24.94■■□□□ 1.58
C9orf40-201ENST00000376854 FAF1Q9UNN5 650 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms