RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 PPIEQ9UNP9 301 aaKnown RBP10.15□□□□□ -0.79
CD28-202ENST00000374481 CACNA1FO60840 1977 aa10.15□□□□□ -0.79
CD28-202ENST00000374481 AP3D1O14617 1153 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 CHRM5P08912 532 aaPredicted RBP10.14□□□□□ -0.79
CD28-202ENST00000374481 MAP2K3P46734 347 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 ZNF135P52742 658 aaPredicted RBP10.14□□□□□ -0.79
CD28-202ENST00000374481 SOX10P56693 466 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 MTPNP58546 118 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 RABL3Q5HYI8 236 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 ANKRD54Q6NXT1 300 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 ZNF621Q6ZSS3 439 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 SPATA19Q7Z5L4 167 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 AGBL3Q8NEM8 1001 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 PHF10Q8WUB8 498 aaKnown RBP10.14□□□□□ -0.79
CD28-202ENST00000374481 TCEAL3Q969E4 200 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 HPDLQ96IR7 371 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 MMP28Q9H239 520 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 PRDM12Q9H4Q4 367 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 ATP13A2Q9NQ11 1180 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 MED11Q9P086 117 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 TRHDEQ9UKU6 1024 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 PCDHGB5Q9Y5G0 923 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 CROCCQ5TZA2 2017 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 NT5C1B-RDH14C9J2C7 533 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 TMX2-CTNND1H3BSU7 103 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 L7N2F9 121 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 MID1O15344 667 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 SCELO95171 688 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 ITGB3P05106 788 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 IGSF11Q5DX21 431 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 PCID2Q5JVF3 399 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 ZNF362Q5T0B9 420 aaPredicted RBP10.14□□□□□ -0.79
CD28-202ENST00000374481 IZUMO1Q8IYV9 350 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 PSD4Q8NDX1 1056 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 OR52K2Q8NGK3 314 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 OR10A6Q8NH74 314 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 MFSD3Q96ES6 412 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 KIF12Q96FN5 646 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 CNDP2Q96KP4 475 aaKnown RBP10.14□□□□□ -0.79
CD28-202ENST00000374481 IL12RB2Q99665 862 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 HSD17B14Q9BPX1 270 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 ATXN3LQ9H3M9 355 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 PDGFCQ9NRA1 345 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 CNTN6Q9UQ52 1028 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 FAM208AQ9UK61 1670 aaKnown RBP10.14□□□□□ -0.79
CD28-202ENST00000374481 WWP2O00308 870 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 OGTO15294 1046 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 VPS26AO75436 327 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 GSTM1P09488 218 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 FGRP09769 529 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 YWHAQP27348 245 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 NUDT1P36639 197 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 PPP3CCP48454 512 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 SLC16A1P53985 500 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 PTPN5P54829 565 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 GBE1Q04446 702 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 CD47Q08722 323 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 LAPTM5Q13571 262 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 TDRD10Q5VZ19 366 aaKnown RBP10.14□□□□□ -0.79
CD28-202ENST00000374481 ZDHHC21Q8IVQ6 265 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 VWA5B2Q8N398 1253 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 TMIEQ8NEW7 156 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 VPS9D1Q9Y2B5 631 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 CRYL1Q9Y2S2 319 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 TMEM150BA6NC51 233 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 NEMP2A6NFY4 417 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 A8MUA0 341 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 SGCEO43556 437 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 MICAL2O94851 1124 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 NPPAP01160 153 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 CES1P23141 567 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 PRKCEQ02156 737 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 SPDYE7PQ495Y7 208 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 RNASE12Q5GAN4 147 aaKnown RBP10.14□□□□□ -0.79
CD28-202ENST00000374481 WDR49Q8IV35 697 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 SLC38A6Q8IZM9 456 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 NPLOC4Q8TAT6 608 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 ZNF671Q8TAW3 534 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 MAPK15Q8TD08 544 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 BLOC1S5Q8TDH9 187 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 PTGFRNQ9P2B2 879 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 GLS2Q9UI32 602 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 RAB23Q9ULC3 237 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 KIAA1257Q9ULG3 409 aa10.14□□□□□ -0.79
CD28-202ENST00000374481 PLA2G6O60733 806 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 MYL3P08590 195 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 ANXA3P12429 323 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 CYP2A7P20853 494 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 MAPK1P28482 360 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 FEN1P39748 380 aaKnown RBP10.13□□□□□ -0.79
CD28-202ENST00000374481 GRIA1P42261 906 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 CCR10P46092 362 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 RGS4P49798 205 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 CDH8P55286 799 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 HUNKP57058 714 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 RIPPLY1Q0D2K3 151 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 ZNF235Q14590 738 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 CERCAMQ5T4B2 595 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 ASB18Q6ZVZ8 466 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 EXOC2Q96KP1 924 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms