RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 SLC9A3R1O14745 358 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 MTSS1O43312 755 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MBTPS2O43462 519 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CACNG3O60359 315 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ECI2O75521 394 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CSTBP04080 98 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 TUBBP07437 444 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MMP2P08253 660 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 DHRS4L1P0CG22 281 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CKMT1AP12532 417 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 SP100P23497 879 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 HLA-FP30511 346 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MAGEA6P43360 314 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 RGRP47804 291 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CORO7P57737 925 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ARF5P84085 180 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 OLIG2Q13516 323 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CDH18Q13634 790 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 HTR4Q13639 388 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 HNRNPDQ14103 355 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 SPARCL1Q14515 664 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 FNBP1LQ5T0N5 605 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ARMC3Q5W041 872 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 TMEM215Q68D42 235 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 NAIF1Q69YI7 327 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 C4orf22Q6V702 233 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ARHGEF18Q6ZSZ5 1173 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ZNF534Q76KX8 674 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 PRPF39Q86UA1 669 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 ADIPOR2Q86V24 386 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 SFTPA1Q8IWL2 248 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 KLHDC8BQ8IXV7 354 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CACNA2D3Q8IZS8 1091 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.57□□□□□ -1.84
MCF2-202ENST00000370573 ZNF527Q8NB42 609 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 SPATA22Q8NHS9 363 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ARRDC2Q8TBH0 407 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CCHCR1Q8TD31 782 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ELSPBP1Q96BH3 223 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CHFRQ96EP1 664 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 OXNAD1Q96HP4 312 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 NECTIN4Q96NY8 510 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 GBA3Q9H227 469 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 NT5MQ9NPB1 228 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ABCB8Q9NUT2 735 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 DNAJC17Q9NVM6 304 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 ZNF446Q9NWS9 450 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 KLHL8Q9P2G9 620 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 IGSF9Q9P2J2 1179 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 EPS15L1Q9UBC2 864 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 VPS51Q9UID3 782 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 VPS28Q9UK41 221 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 KIF26AQ9ULI4 1882 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 TRBV23OR9-2A0A075B6M9 112 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 TYW5A2RUC4 315 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 ANTXRLA6NF34 631 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 C2CD4DB7Z1M9 353 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 C22orf46C9J442 243 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 K7ERQ8 282 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CHADO15335 359 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 HOXC11O43248 304 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 SMAD6O43541 496 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 NPHS1O60500 1241 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 AVILO75366 819 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 TULP3O75386 442 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 BANF1O75531 89 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ZNF821O75541 412 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 FOSL2P15408 326 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 TPSB2P20231 275 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MCM3P25205 808 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 GDI1P31150 447 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 FDFT1P37268 417 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MMP13P45452 471 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 HSPA7P48741 367 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MAXP61244 160 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 BASP1P80723 227 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 CAV1Q03135 178 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CALCOCO2Q13137 446 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 SMAD4Q13485 552 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 MTM1Q13496 603 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 RUNX3Q13761 415 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 BLMHQ13867 455 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MYBPC3Q14896 1274 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MORF4L2Q15014 288 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 PDGFRLQ15198 375 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 TPSAB1Q15661 275 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 UAP1Q16222 522 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 GEN1Q17RS7 908 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 AAK1Q2M2I8 961 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MPEG1Q2M385 716 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 FUT11Q495W5 492 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MARC1Q5VT66 337 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 KCTD11Q693B1 232 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 TIGD7Q6NT04 549 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 RETSATQ6NUM9 610 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 JMJD6Q6NYC1 403 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 KDELC1Q6UW63 502 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CAND1Q86VP6 1230 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 ZCCHC9Q8N567 271 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms