RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 MATN3O15232 486 aa16.71■□□□□ 0.26
DKC1-201ENST00000369550 FADS2O95864 444 aaKnown RBP16.71■□□□□ 0.26
DKC1-201ENST00000369550 S1PR4O95977 384 aa16.71■□□□□ 0.26
DKC1-201ENST00000369550 F9P00740 461 aa16.71■□□□□ 0.26
DKC1-201ENST00000369550 KRT8P05787 483 aa16.71■□□□□ 0.26
DKC1-201ENST00000369550 MTHFD2P13995 350 aa16.71■□□□□ 0.26
DKC1-201ENST00000369550 GGT1P19440 569 aa16.71■□□□□ 0.26
DKC1-201ENST00000369550 IL12AP29459 219 aa16.71■□□□□ 0.26
DKC1-201ENST00000369550 TGFBR1P36897 503 aa16.71■□□□□ 0.26
DKC1-201ENST00000369550 TAF6P49848 677 aa16.71■□□□□ 0.26
DKC1-201ENST00000369550 CCNA1P78396 465 aa16.71■□□□□ 0.26
DKC1-201ENST00000369550 STEAP3Q658P3 488 aa16.71■□□□□ 0.26
DKC1-201ENST00000369550 EID3Q8N140 333 aa16.71■□□□□ 0.26
DKC1-201ENST00000369550 RPL3LQ92901 407 aaKnown RBP16.71■□□□□ 0.26
DKC1-201ENST00000369550 SLC47A1Q96FL8 570 aa16.71■□□□□ 0.26
DKC1-201ENST00000369550 YME1L1Q96TA2 773 aa16.71■□□□□ 0.26
DKC1-201ENST00000369550 CARS2Q9HA77 564 aaKnown RBP16.71■□□□□ 0.26
DKC1-201ENST00000369550 MARCH4Q9P2E8 410 aaPredicted RBP16.71■□□□□ 0.26
DKC1-201ENST00000369550 MAFKO60675 156 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 GUCY1B2O75343 617 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 KCNK2O95069 426 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 NPPAP01160 153 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 FTH1P02794 183 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 SERPINH1P50454 418 aaKnown RBP16.7■□□□□ 0.26
DKC1-201ENST00000369550 ZNF135P52742 658 aaPredicted RBP16.7■□□□□ 0.26
DKC1-201ENST00000369550 PHC1P78364 1004 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 CLCA4Q14CN2 919 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 TRIP4Q15650 581 aaPredicted RBP16.7■□□□□ 0.26
DKC1-201ENST00000369550 COLEC12Q5KU26 742 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.7■□□□□ 0.26
DKC1-201ENST00000369550 PAQR9Q6ZVX9 377 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 USP43Q70EL4 1123 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 OSTM1Q86WC4 334 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 FAM126BQ8IXS8 530 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 YIPF6Q96EC8 236 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 PPP1R2P1Q96PQ5 205 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 C6orf62Q9GZU0 229 aaPredicted RBP16.7■□□□□ 0.26
DKC1-201ENST00000369550 FAM49AQ9H0Q0 323 aaPredicted RBP16.7■□□□□ 0.26
DKC1-201ENST00000369550 MIR1-1HGQ9H1L0 117 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 ACTR8Q9H981 624 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 PCDHGB1Q9Y5G3 927 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 M0QX08 132 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 PIRO00625 290 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 PRMT5O14744 637 aaPredicted RBP16.7■□□□□ 0.26
DKC1-201ENST00000369550 RGS13O14921 159 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 IDH3BO43837 385 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 CCNKO75909 580 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 RECQL4O94761 1208 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 IL1RL1Q01638 556 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 ITKQ08881 620 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 RAPSNQ13702 412 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 LBX2Q6XYB7 198 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 FBXO39Q8N4B4 442 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 PROKR1Q8TCW9 393 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 GIPC2Q8TF65 315 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 ISG20Q96AZ6 181 aaKnown RBP16.7■□□□□ 0.26
DKC1-201ENST00000369550 TMEM209Q96SK2 561 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 ACOX2Q99424 681 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 BRINP2Q9C0B6 783 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 NXF3Q9H4D5 531 aaKnown RBP16.7■□□□□ 0.26
DKC1-201ENST00000369550 USE1Q9NZ43 259 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 ADGRE2Q9UHX3 823 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 UTS2RQ9UKP6 389 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 RNF112Q9ULX5 631 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 INVSQ9Y283 1065 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 PCDHGA10Q9Y5H3 936 aa16.7■□□□□ 0.26
DKC1-201ENST00000369550 PCNTO95613 3336 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 NCF1BA6NI72 391 aaPredicted RBP16.69■□□□□ 0.26
DKC1-201ENST00000369550 NCF1CA8MVU1 366 aaPredicted RBP16.69■□□□□ 0.26
DKC1-201ENST00000369550 WISP3O95389 354 aaPredicted RBP16.69■□□□□ 0.26
DKC1-201ENST00000369550 NDST3O95803 873 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 CD4P01730 458 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 NCF1P14598 390 aaPredicted RBP16.69■□□□□ 0.26
DKC1-201ENST00000369550 PRDX3P30048 256 aaKnown RBP16.69■□□□□ 0.26
DKC1-201ENST00000369550 CASP3P42574 277 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 ARSDP51689 593 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 ERVK-8P63133 956 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 ZNF181Q2M3W8 571 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 DESI1Q6ICB0 168 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 SLC27A1Q6PCB7 646 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 GPRIN1Q7Z2K8 1008 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 RIOX2Q8IUF8 465 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 OR2T12Q8NG77 320 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 BTBD2Q9BX70 525 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 SMPD4Q9NXE4 827 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 AASSQ9UDR5 926 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 TPRKBQ9Y3C4 175 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 PAPPA2Q9BXP8 1791 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 SAGE2PA6NJ88 616 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 RYKP34925 604 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 CLK1P49759 484 aaKnown RBP16.69■□□□□ 0.26
DKC1-201ENST00000369550 NKG7Q16617 165 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 ANKS6Q68DC2 871 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 TXNDC11Q6PKC3 985 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 TMC5Q6UXY8 1006 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 GALNT5Q7Z7M9 940 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 GALNT13Q8IUC8 556 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 ELMOD1Q8N336 334 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 PROX1Q92786 737 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 SLC39A8Q9C0K1 460 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms