RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 GPATCH2LQ9NWQ4 482 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 GDAP2Q9NXN4 497 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 TCAF1Q9Y4C2 921 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 LNP1A1A4G5 178 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 FAM149AA5PLN7 773 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 PRORSD1PA6NEY8 169 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 C4orf47A7E2U8 309 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 CDX4O14627 284 aaPredicted RBP7.65□□□□□ -1.18
CCL28-201ENST00000361115 B4GALT5O43286 388 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 BCL10O95999 233 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 CCNA2P20248 432 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 TBXAS1P24557 533 aaPredicted RBP7.65□□□□□ -1.18
CCL28-201ENST00000361115 GABRR2P28476 465 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 SLC7A1P30825 629 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 HPCAL1P37235 193 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 CCR2P41597 374 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 ABCG1P45844 678 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 IFITM3Q01628 133 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 NR6A1Q15406 480 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 STILQ15468 1287 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 EML3Q32P44 896 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 ARL13BQ3SXY8 428 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 TIGD2Q4W5G0 525 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 CASC4Q6P4E1 433 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 TSSK4Q6SA08 328 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 CES3Q6UWW8 571 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 KRT77Q7Z794 578 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 DSG4Q86SJ6 1040 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 ANKFN1Q8N957 763 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 TNIP2Q8NFZ5 429 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 ZNF641Q96N77 438 aaPredicted RBP7.65□□□□□ -1.18
CCL28-201ENST00000361115 IMPG2Q9BZV3 1241 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 SOX17Q9H6I2 414 aaPredicted RBP7.65□□□□□ -1.18
CCL28-201ENST00000361115 RPF1Q9H9Y2 349 aaKnown RBP7.65□□□□□ -1.18
CCL28-201ENST00000361115 SUCOQ9UBS9 1254 aaKnown RBP7.65□□□□□ -1.18
CCL28-201ENST00000361115 PCDHGC3Q9UN70 934 aa7.65□□□□□ -1.18
CCL28-201ENST00000361115 COPG1Q9Y678 874 aaKnown RBP7.65□□□□□ -1.18
CCL28-201ENST00000361115 ZFC3H1O60293 1989 aaKnown RBP7.65□□□□□ -1.18
CCL28-201ENST00000361115 ARHGAP33O14559 1287 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 HDAC3O15379 428 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 GCATO75600 419 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 CLPXO76031 633 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 ENDOD1O94919 500 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 HNRNPLP14866 589 aaKnown RBP eCLIP7.65□□□□□ -1.19
CCL28-201ENST00000361115 PTPN9P43378 593 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 PCYT1AP49585 367 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 AFF1P51825 1210 aaKnown RBP7.65□□□□□ -1.19
CCL28-201ENST00000361115 NME5P56597 212 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 IFITM2Q01629 132 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 FOXC1Q12948 553 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 HERC3Q15034 1050 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 DLG2Q15700 870 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 INSCQ1MX18 579 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 PGS1Q32NB8 556 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 C6orf10Q5SRN2 563 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 STEAP4Q687X5 459 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 SEL1L3Q68CR1 1132 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 SCARA5Q6ZMJ2 495 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 RNF19BQ6ZMZ0 732 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 PIWIL3Q7Z3Z3 882 aaKnown RBP7.65□□□□□ -1.19
CCL28-201ENST00000361115 TMPRSS12Q86WS5 348 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 ZNF354CQ86Y25 554 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 TMEM151BQ8IW70 566 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 CANT1Q8WVQ1 401 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 EFHD2Q96C19 240 aaPredicted RBP7.65□□□□□ -1.19
CCL28-201ENST00000361115 C8orf48Q96LL4 319 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 CPXM1Q96SM3 734 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 ILKAPQ9H0C8 392 aaPredicted RBP7.65□□□□□ -1.19
CCL28-201ENST00000361115 SNX15Q9NRS6 342 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 KLHL3Q9UH77 587 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 ZDHHC2Q9UIJ5 367 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 TRAF6Q9Y4K3 522 aa7.65□□□□□ -1.19
CCL28-201ENST00000361115 ANKRD34BA5PLL1 514 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 TRIM24O15164 1050 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 GJB3O75712 270 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 MYO1DO94832 1006 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 PIGNO95427 931 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 ERVK-10P10266 1014 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 TFE3P19532 575 aaPredicted RBP7.64□□□□□ -1.19
CCL28-201ENST00000361115 CDH5P33151 784 aaPredicted RBP7.64□□□□□ -1.19
CCL28-201ENST00000361115 GJA4P35212 333 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 MERTKQ12866 999 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 DNASE1L3Q13609 305 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 SF3A2Q15428 464 aaKnown RBP7.64□□□□□ -1.19
CCL28-201ENST00000361115 TMEM92Q6UXU6 159 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 LIMS2Q7Z4I7 341 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 CYGBQ8WWM9 190 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 TCEAL4Q96EI5 215 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 RNF157Q96PX1 679 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 TCF12Q99081 682 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 C1orf50Q9BV19 199 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 CAB39LQ9H9S4 337 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 CISHQ9NSE2 258 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 AGO2Q9UKV8 859 aaKnown RBP7.64□□□□□ -1.19
CCL28-201ENST00000361115 SCML1Q9UN30 329 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 CARD8Q9Y2G2 431 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 PCDHB9Q9Y5E1 797 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 TMEM114B3SHH9 223 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 TRIM13O60858 407 aa7.64□□□□□ -1.19
CCL28-201ENST00000361115 RSL1D1O76021 490 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms