RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 CYP4F12Q9HCS2 524 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 LATS2Q9NRM7 1088 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 ZNHIT2Q9UHR6 403 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 SLC6A14Q9UN76 642 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 MED16Q9Y2X0 877 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 MTO1Q9Y2Z2 717 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 VWA7Q9Y334 891 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 IKBKGQ9Y6K9 419 aa12.22□□□□□ -0.45
NIF3L1-201ENST00000359683 C17orf113A0A1B0GUU1 675 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 IQCF5A8MTL0 148 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 KMOO15229 486 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 KCNJ13O60928 360 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 POP7O75817 140 aaKnown RBP12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 RASGRP1O95267 797 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 CSF2P04141 144 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 RETP07949 1114 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 ITGA2BP08514 1039 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 GSTM1P09488 218 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 MPLP40238 635 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 BLKP51451 505 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 HK3P52790 923 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 TIAL1Q01085 375 aaKnown RBP eCLIP12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 GSTM4Q03013 218 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 HECTD2Q5U5R9 776 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 LRIG3Q6UXM1 1119 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 GALNT13Q8IUC8 556 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 TRAPPC5Q8IUR0 188 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 HID1Q8IV36 788 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 BEND7Q8N7W2 519 aaPredicted RBP12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 ACVR1CQ8NER5 493 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 KCNJ9Q92806 393 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 ZIM3Q96PE6 472 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 CCM2Q9BSQ5 444 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 CARS2Q9HA77 564 aaKnown RBP12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 TRNAU1APQ9NX07 287 aaKnown RBP12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 DLL3Q9NYJ7 618 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 EURLQ9NYK6 297 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 GULP1Q9UBP9 304 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 MOSPD1Q9UJG1 213 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 PRKAB1Q9Y478 270 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 SNX11Q9Y5W9 270 aa12.21□□□□□ -0.46
NIF3L1-201ENST00000359683 FAM95CA0A1B0GW59 222 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 KLHL33A6NCF5 533 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 MGAT4DA6NG13 374 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 PATE3B3GLJ2 98 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 RASGRF2O14827 1237 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 NIPSNAP2O75323 286 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 KRT38O76015 456 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 FTH1P02794 183 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 NME1P15531 152 aaKnown RBP12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 CNTFP26441 200 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 GNPDA1P46926 289 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 RXRGP48443 463 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 IFFO1Q0D2I5 559 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 RSPO4Q2I0M5 234 aaPredicted RBP12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 ZNF658BQ4V348 819 aaPredicted RBP12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 ZNF542PQ5EBM4 170 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 TRIM61Q5EBN2 209 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 LGSNQ5TDP6 509 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 FAM45BPQ6NSW5 357 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 CRTC3Q6UUV7 619 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 HDXQ7Z353 690 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 RD3Q7Z3Z2 195 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 PHACTR4Q8IZ21 702 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 CNPY4Q8N129 248 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 KRT222Q8N1A0 295 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 OXR1Q8N573 874 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 GPATCH11Q8N954 259 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 SPDYE1Q8NFV5 336 aaPredicted RBP12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 FAM45AQ8TCE6 357 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 LKAAEAR1Q8TD35 194 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 EPS8L3Q8TE67 593 aaKnown RBP12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 ATXN7L3BQ96GX2 97 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 PANX3Q96QZ0 392 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 OR2M4Q96R27 311 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 NDNQ99608 321 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 ZDHHC5Q9C0B5 715 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 TM7SF3Q9NS93 570 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 KLHL42Q9P2K6 505 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 PSMC3IPQ9P2W1 217 aaPredicted RBP12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 SLC23A2Q9UGH3 650 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 GMEB2Q9UKD1 530 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 GPSM3Q9Y4H4 160 aa12.2□□□□□ -0.46
NIF3L1-201ENST00000359683 PRR19A6NJB7 356 aa12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 CDH16O75309 829 aa12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 TRIM16O95361 564 aa12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 CFIP05156 583 aa12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 SNRPAP09012 282 aaKnown RBP12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 JUNDP17535 347 aa12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 CHRM3P20309 590 aa12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 FDXRP22570 491 aa12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 CCR7P32248 378 aa12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 SKIV2L2P42285 1042 aaKnown RBP12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 SLCO1A2P46721 670 aa12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 CLCN7P51798 805 aa12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 CLCNKAP51800 687 aa12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 CDKN2DP55273 166 aa12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 TAS2R39P59534 338 aa12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 IRX4P78413 519 aa12.19□□□□□ -0.46
NIF3L1-201ENST00000359683 ARHGAP8P85298 464 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms