RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 ZNF786Q8N393 782 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 LPCAT1Q8NF37 534 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 SLCO4A1Q96BD0 722 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 SAMD11Q96NU1 681 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 OMDQ99983 421 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 ERGIC3Q9Y282 383 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 TSC22D4Q9Y3Q8 395 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 RAI2Q9Y5P3 530 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 CNOT3O75175 753 aaKnown RBP18.4■□□□□ 0.54
SNX11-201ENST00000359238 MYF6P23409 242 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 HOXA9P31269 272 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 CCR10P46092 362 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 TRAP1Q12931 704 aaKnown RBP18.4■□□□□ 0.54
SNX11-201ENST00000359238 FGD3Q5JSP0 725 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 IRAK1BP1Q5VVH5 260 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 HMBOX1Q6NT76 420 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 TMC5Q6UXY8 1006 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 AGR3Q8TD06 166 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 VOPP1Q96AW1 172 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 RMDN1Q96DB5 314 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 LINC00597Q9H2U6 94 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 RETREG1Q9H6L5 497 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 ADA2Q9NZK5 511 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 TCRBV3S1A0A5B6 114 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 NDST3O95803 873 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 GOT2P00505 430 aaKnown RBP18.39■□□□□ 0.53
SNX11-201ENST00000359238 HNRNPA1P09651 372 aaKnown RBP eCLIP18.39■□□□□ 0.53
SNX11-201ENST00000359238 CEBPBP17676 345 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 CD247P20963 164 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 MPSTP25325 297 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 STK19P49842 368 aaPredicted RBP18.39■□□□□ 0.53
SNX11-201ENST00000359238 RPL14P50914 215 aaKnown RBP18.39■□□□□ 0.53
SNX11-201ENST00000359238 NR1D2Q14995 579 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 ARHGAP15Q53QZ3 475 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 GPR107Q5VW38 600 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 TMEM25Q86YD3 366 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 CILP2Q8IUL8 1156 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 TANKQ92844 425 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 ELMO2Q96JJ3 720 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 EFHD1Q9BUP0 239 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 PRKD2Q9BZL6 878 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 TASP1Q9H6P5 420 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 TMEM9Q9P0T7 183 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 CRYL1Q9Y2S2 319 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 RFXAPO00287 272 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 ZNF821O75541 412 aaPredicted RBP18.39■□□□□ 0.53
SNX11-201ENST00000359238 FGF1P05230 155 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 HLA-DPA1P20036 260 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 RPL10P27635 214 aaKnown RBP18.39■□□□□ 0.53
SNX11-201ENST00000359238 PSME3P61289 254 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 PRAMEP78395 509 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 BNIP3Q12983 259 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 PMS2P3Q13401 168 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 PRSS36Q5K4E3 855 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 COL13A1Q5TAT6 717 aaPredicted RBP18.39■□□□□ 0.53
SNX11-201ENST00000359238 SLC2A7Q6PXP3 512 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 PIM3Q86V86 326 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 PACRGLQ8N7B6 248 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 MFSD2AQ8NA29 543 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 NXNL1Q96CM4 212 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 EID2BQ96D98 161 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 NPAS2Q99743 824 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 GATA5Q9BWX5 397 aaPredicted RBP18.39■□□□□ 0.53
SNX11-201ENST00000359238 NOL11Q9H8H0 719 aaKnown RBP18.39■□□□□ 0.53
SNX11-201ENST00000359238 SUN2Q9UH99 717 aa18.39■□□□□ 0.53
SNX11-201ENST00000359238 FNDC3AQ9Y2H6 1198 aaKnown RBP18.39■□□□□ 0.53
SNX11-201ENST00000359238 CFAP99D6REC4 459 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 GRID2O43424 1007 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 BMP2P12643 396 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 RAB39AQ14964 217 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 DEPDC1Q5TB30 811 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 TMEM207Q6UWW9 146 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 CHSY3Q70JA7 882 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 ITFG1Q8TB96 612 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 GPR78Q96P69 363 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 TNKS2Q9H2K2 1166 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 BPIFA1Q9NP55 256 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 TDP1Q9NUW8 608 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 ATAD3AQ9NVI7 634 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 NCKIPSDQ9NZQ3 722 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 VTI1BQ9UEU0 232 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 CDYLQ9Y232 598 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 PCDHGA7Q9Y5G6 932 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 PIGNO95427 931 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 S1PR4O95977 384 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 PAMP19021 973 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 HLA-FP30511 346 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 CDKN2DP55273 166 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 NME5P56597 212 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 PRKCQQ04759 706 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 PDE12Q6L8Q7 609 aaKnown RBP18.38■□□□□ 0.53
SNX11-201ENST00000359238 ZNF549Q6P9A3 640 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 NCEH1Q6PIU2 408 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 RTL10Q7L3V2 364 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 CAMK1DQ8IU85 385 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 VN1R2Q8NFZ6 395 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 BRSK1Q8TDC3 778 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 ANKRD49Q8WVL7 239 aa18.38■□□□□ 0.53
SNX11-201ENST00000359238 CNDP2Q96KP4 475 aaKnown RBP18.38■□□□□ 0.53
SNX11-201ENST00000359238 PCDHAC1Q9H158 963 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 536.2 ms