RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 FAM47EQ6ZV65 393 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 TRIM69Q86WT6 500 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 HEATR4Q86WZ0 1026 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 NKAPQ8N5F7 415 aaKnown RBP17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 BEND7Q8N7W2 519 aaPredicted RBP17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 OR2T34Q8NGX1 318 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 LGR4Q9BXB1 951 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 MRPL46Q9H2W6 279 aaKnown RBP17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 SGK2Q9HBY8 427 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 SPATS2LQ9NUQ6 558 aaKnown RBP17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 ANKRD12Q6UB98 2062 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 AOAHP28039 575 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 TEAD1P28347 426 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 IGFALSP35858 605 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 IL2P60568 153 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 CDK3Q00526 305 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 INPP5AQ14642 412 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 OR4D1Q15615 310 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 ACSBG2Q5FVE4 666 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 ZYG11AQ6WRX3 759 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 C10orf107Q8IVU9 208 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 SPEM1Q8N4L4 309 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 ZBTB2Q8N680 514 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 OR6Y1Q8NGX8 325 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 ASB12Q8WXK4 309 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 LINGO1Q96FE5 620 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 PANX3Q96QZ0 392 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 ELAC2Q9BQ52 826 aaKnown RBP17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 TSSK1BQ9BXA7 367 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 TEX101Q9BY14 249 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 OR2AG1Q9H205 316 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 ALG9Q9H6U8 611 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 TRIM39Q9HCM9 518 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 FZD3Q9NPG1 666 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 ATXN10Q9UBB4 475 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 CYP8B1Q9UNU6 501 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 SLC31A1O15431 190 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 LILRB5O75023 590 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 SNNO75324 88 aaPredicted RBP17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 SEMA4FO95754 770 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 DCNP07585 359 aaKnown RBP17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 RBP1P09455 135 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 MYL2P10916 166 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 FGF3P11487 239 aaPredicted RBP17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 GRK2P25098 689 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 TRIM23P36406 574 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 RPS9P46781 194 aaKnown RBP17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 MTAPQ13126 283 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 ZSCAN26Q16670 478 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 CGB2Q6NT52 195 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 ZNF771Q7L3S4 317 aaPredicted RBP17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 OTOAQ7RTW8 1153 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 SEC16BQ96JE7 1060 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 C7orf26Q96N11 449 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 SIT1Q9Y3P8 196 aa17.87■□□□□ 0.45
SMARCD3-202ENST00000356800 LRRC72A6NJI9 287 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 CDC7O00311 574 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 MAGEC1O60732 1142 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 CDK14O94921 469 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 SERPINE1P05121 402 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 PRLHRP49683 370 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 PRKAA2P54646 552 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 OCRLQ01968 901 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 BST1Q10588 318 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 GBX1Q14549 363 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 TMEM220Q6QAJ8 160 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 FRMD1Q8N878 549 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 SREK1Q8WXA9 508 aaKnown RBP17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 TOE1Q96GM8 510 aaKnown RBP17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 PDLIM5Q96HC4 596 aaKnown RBP17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 TPSD1Q9BZJ3 242 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 OXSMQ9NWU1 459 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 KLHL42Q9P2K6 505 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 TMEM98Q9Y2Y6 226 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 OR1A2Q9Y585 309 aa17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 PCYT1BQ9Y5K3 369 aaPredicted RBP17.86■□□□□ 0.45
SMARCD3-202ENST00000356800 NPEPPSL1A6NEC2 478 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 TMEM202A6NGA9 273 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 DLX3O60479 287 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 H2AFYO75367 372 aaKnown RBP17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 TGDSO95455 350 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 ZNF8P17098 575 aaPredicted RBP17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 ATP6V0D1P61421 351 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 STX3Q13277 289 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 BCL7AQ4VC05 210 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 PIWIL4Q7Z3Z4 852 aaKnown RBP17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 SPATA21Q7Z572 469 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 CACNA2D3Q8IZS8 1091 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 PPP1R14CQ8TAE6 165 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 KIAA1191Q96A73 305 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 ATOH8Q96SQ7 321 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 MYOCQ99972 504 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 C1QTNF7Q9BXJ2 289 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 ZCCHC2Q9C0B9 1178 aaKnown RBP17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 TFB2MQ9H5Q4 396 aaKnown RBP17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 EPHX3Q9H6B9 360 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 C6orf106Q9H6K1 298 aaPredicted RBP17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 THAP1Q9NVV9 213 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 WSB2Q9NYS7 404 aaPredicted RBP17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 TSR3Q9UJK0 312 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms