RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TNMDQ9H2S6 317 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ANKZF1Q9H8Y5 726 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 MRPL44Q9H9J2 332 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 EQTNQ9NQ60 294 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 HINT3Q9NQE9 182 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PHPT1Q9NRX4 125 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ABCB8Q9NUT2 735 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 FOXJ2Q9P0K8 574 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 UBA2Q9UBT2 640 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 POLLQ9UGP5 575 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 COG5Q9UP83 839 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 KNDC1Q76NI1 1749 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ABCA8O94911 1581 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SYCE3A1L190 88 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 FAM90A10PA6NDY2 464 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CCDC69A6NI79 296 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 FOXO6A8MYZ6 492 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 I6L893 689 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 J3QR06 171 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 M0QZ24 198 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CCL24O00175 119 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TO15178 435 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ZBTB14O43829 449 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 BAG2O95816 211 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 HSP90AB1P08238 724 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 IRF1P10914 325 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM11P17152 192 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 MAPK3P27361 379 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 KIF5BP33176 963 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 KRT2P35908 639 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 WNT5AP41221 380 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 RFX5P48382 616 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 NT5C2P49902 561 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TPD52P55327 224 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 POLR2LP62875 67 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ERCC6LQ2NKX8 1250 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ZXDCQ2QGD7 858 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 KBTBD12Q3ZCT8 623 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 IQCCQ4KMZ1 466 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 INTS8Q75QN2 995 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TMPRSS11BQ86T26 416 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 NUDT13Q86X67 352 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SPATA6LQ8N4H0 392 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 BEST2Q8NFU1 509 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 OR10S1Q8NGN2 331 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 FBXL8Q96CD0 374 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 FAM89AQ96GI7 184 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 C16orf58Q96GQ5 468 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 APOLD1Q96LR9 279 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SEPT5Q99719 369 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 FNDC11Q9BVV2 318 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ACPTQ9BZG2 426 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SLA2Q9H6Q3 261 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 LMAN1LQ9HAT1 526 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CPNE5Q9HCH3 593 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 MMP25Q9NPA2 562 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SYBUQ9NX95 663 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 NDUFA13Q9P0J0 144 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 OR14J1Q9UGF5 321 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SLC24A2Q9UI40 661 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SH3BGRL2Q9UJC5 107 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TNXBP22105 4242 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 NUP160Q12769 1436 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 A0A1W2PPK0 400 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TCRBV21S2A2A0A5A6 115 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PIPSLA2A3N6 862 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 C2CD4BA6NLJ0 364 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PSMD14O00487 310 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ADAM10O14672 748 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SLC22A2O15244 555 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 EIF3DO15371 548 aaKnown RBP eCLIP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PRPSAP2O60256 369 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PRAF2O60831 178 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 HLA-DQA2P01906 255 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 GNAZP19086 355 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ITIH1P19827 911 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 HLA-DPA1P20036 260 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 NKX2-1P43699 371 aaPredicted RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 RAP1GAPP47736 663 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ARFIP1P53367 373 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 NUDT6P53370 316 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 GSDMDP57764 484 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 STARD6P59095 220 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 TRA2BP62995 288 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 CEBPEQ15744 281 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SGCBQ16585 318 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 UGP2Q16851 508 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 AAGABQ6PD74 315 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 PAPD4Q6PIY7 484 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 SLC36A4Q6YBV0 504 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 DDIASQ8IXT1 998 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF843Q8N446 348 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 BANPQ8N9N5 519 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 OR7G3Q8NG95 312 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 EDAQ92838 391 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 FAM162AQ96A26 154 aa1.62□□□□□ -2.15
BRCA1-202ENST00000354071 MSI2Q96DH6 328 aaKnown RBP1.62□□□□□ -2.15
BRCA1-202ENST00000354071 ERLEC1Q96DZ1 483 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms