RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TCRBV5S1A1TA0A578 114 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 TCRBV5S2A0A599 114 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 CCDC182A6NF36 153 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 PRMT5O14744 637 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-203ENST00000349748 SLC16A4O15374 487 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 KPNA6O60684 536 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 IFNA14P01570 189 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 FTH1P02794 183 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 BTF3P20290 206 aaKnown RBP10.54□□□□□ -0.72
CAPN3-203ENST00000349748 GP5P40197 560 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 HNF4AP41235 474 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 NR2C2P49116 596 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 C1QTNF8P60827 252 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 ISL1P61371 349 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 GRM3Q14832 879 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 AANATQ16613 207 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 TRIM60Q495X7 471 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 ZMAT1Q5H9K5 638 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 ZBTB37Q5TC79 503 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 TMC8Q8IU68 726 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 FUNDC1Q8IVP5 155 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 ASB12Q8WXK4 309 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 MAGEB10Q96LZ2 347 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-203ENST00000349748 KIFC3Q9BVG8 833 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 C1QTNF6Q9BXI9 259 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 CATSPERBQ9H7T0 1116 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 SP110Q9HB58 689 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 TNFRSF12AQ9NP84 129 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 TAS2R7Q9NYW3 318 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 SEPT9Q9UHD8 586 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-203ENST00000349748 FBXO10Q9UK96 956 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 MTF2Q9Y483 593 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-203ENST00000349748 LOC100506127A0A0U1RQW1 187 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 SPDYE2BA6NHP3 402 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 SPATA31C2B4DYI2 1134 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 TBX3O15119 743 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 ZNF623O75123 536 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 RETP07949 1114 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 NR3C2P08235 984 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 SBK3P0C264 359 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 SPDYE6P0CI01 402 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 ACO1P21399 889 aaKnown RBP10.53□□□□□ -0.72
CAPN3-203ENST00000349748 APLP1P51693 650 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 IL5RAQ01344 420 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 CNTN2Q02246 1040 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 TNK1Q13470 666 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 SEMA5AQ13591 1074 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 FSCN1Q16658 493 aaKnown RBP10.53□□□□□ -0.72
CAPN3-203ENST00000349748 SPDYE2Q495Y8 402 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 RABL3Q5HYI8 236 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 ZNF484Q5JVG2 852 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 NOL9Q5SY16 702 aaKnown RBP10.53□□□□□ -0.72
CAPN3-203ENST00000349748 SYT6Q5T7P8 510 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-203ENST00000349748 TTC23Q5W5X9 447 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 FSTL4Q6MZW2 842 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 KIF18BQ86Y91 864 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 SPNS2Q8IVW8 549 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 CDAN1Q8IWY9 1227 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 ZNF555Q8NEP9 628 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 INTS12Q96CB8 462 aaKnown RBP10.53□□□□□ -0.72
CAPN3-203ENST00000349748 TMCO6Q96DC7 493 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 SCYL1Q96KG9 808 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 Q96MT0 163 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 GMLQ99445 158 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 OMDQ99983 421 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 MS4A7Q9GZW8 240 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-203ENST00000349748 FAM49BQ9NUQ9 324 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 HRH3Q9Y5N1 445 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 CACNG2Q9Y698 323 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 GREB1LQ9C091 1923 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-203ENST00000349748 DDTLA6NHG4 134 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-203ENST00000349748 ZNF487B1APH4 448 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 NCAM2O15394 837 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 AIREO43918 545 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 TRAPPC2P0DI81 140 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 TRAPPC2BP0DI82 140 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 ERVFC1P60507 584 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 BNC1Q01954 994 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 TAZQ16635 292 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 FUT11Q495W5 492 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 RAB6CQ53S08 254 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 PRAMEF18Q5VWM3 479 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 SPATA6LQ8N4H0 392 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 ZNF578Q96N58 590 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-203ENST00000349748 FOPNLQ96NB1 174 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 AGAP2Q99490 1192 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 RAB6CQ9H0N0 254 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 KCNH4Q9UQ05 1017 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 ACTL7AQ9Y615 435 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 LINC00587B1AMM8 73 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 SLCO1B7G3V0H7 640 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 MGAT1P26572 445 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 LIPAP38571 399 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 TPMTP51580 245 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 RGS1Q08116 209 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 FLYWCH1Q4VC44 716 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 CACHD1Q5VU97 1274 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 LAIR1Q6GTX8 287 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 CNSTQ6PJW8 725 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 SIAH1Q8IUQ4 282 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms