RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 FAM72AQ5TYM5 149 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 FAM72DQ6L9T8 149 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 HFE2Q6ZVN8 426 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 FAM72BQ86X60 149 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 ZDHHC13Q8IUH4 622 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 CLEC4FQ8N1N0 589 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 MFSD4AQ8N468 514 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 TMEM199Q8N511 208 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 ATP6V0D2Q8N8Y2 350 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 CHDHQ8NE62 594 aaPredicted RBP15.7■□□□□ 0.1
HMGA1-202ENST00000347617 C2orf15Q8WU43 125 aaKnown RBP15.7■□□□□ 0.1
HMGA1-202ENST00000347617 CHAC2Q8WUX2 184 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 NSMCE3Q96MG7 304 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 TMEM209Q96SK2 561 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 YME1L1Q96TA2 773 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 ATP13A3Q9H7F0 1226 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 TMPRSS4Q9NRS4 437 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 ABCC13Q9NSE7 274 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 AIG1Q9NVV5 245 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 COMMD8Q9NX08 183 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 COX16Q9P0S2 106 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 TBX21Q9UL17 535 aa15.7■□□□□ 0.1
HMGA1-202ENST00000347617 NLRC5Q86WI3 1866 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 DNAH12Q6ZR08 3092 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 PCNTO95613 3336 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 ATP6AP2A0A1C7CYW4 349 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 SAGE2PA6NJ88 616 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 F8W810 466 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 PIP5K1BO14986 540 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 ATP6AP2O75787 350 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 CDK14O94921 469 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 GALTP07902 379 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 MTHFD1P11586 935 aaKnown RBP15.69■□□□□ 0.1
HMGA1-202ENST00000347617 NEK2P51955 445 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 PITX1P78337 314 aaPredicted RBP15.69■□□□□ 0.1
HMGA1-202ENST00000347617 EIF4EBP2Q13542 120 aaPredicted RBP15.69■□□□□ 0.1
HMGA1-202ENST00000347617 CTF1Q16619 201 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 RBM20Q5T481 1227 aaKnown RBP15.69■□□□□ 0.1
HMGA1-202ENST00000347617 ZNF280DQ6N043 979 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 CNKSR3Q6P9H4 555 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 FBXO46Q6PJ61 603 aaPredicted RBP15.69■□□□□ 0.1
HMGA1-202ENST00000347617 PRR23CQ6ZRP0 262 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 CHST15Q7LFX5 561 aaPredicted RBP15.69■□□□□ 0.1
HMGA1-202ENST00000347617 ARMC8Q8IUR7 673 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 IPMKQ8NFU5 416 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 OR6Q1Q8NGQ2 317 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 RHEBL1Q8TAI7 183 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 ARMC5Q96C12 935 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 TUBGCP3Q96CW5 907 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 CEP295NLQ96MC4 621 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 RNF145Q96MT1 663 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 NODALQ96S42 347 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 RBM4BQ9BQ04 359 aaKnown RBP15.69■□□□□ 0.1
HMGA1-202ENST00000347617 RBM4Q9BWF3 364 aaKnown RBP15.69■□□□□ 0.1
HMGA1-202ENST00000347617 BRINP2Q9C0B6 783 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 ARNT2Q9HBZ2 717 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 FAM118AQ9NWS6 357 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 IL37Q9NZH6 218 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 UBP1Q9NZI7 540 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 SUN2Q9UH99 717 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 PRG3Q9Y2Y8 225 aaPredicted RBP15.69■□□□□ 0.1
HMGA1-202ENST00000347617 PCDHB5Q9Y5E4 795 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 PATJQ8NI35 1801 aa15.69■□□□□ 0.1
HMGA1-202ENST00000347617 NUP205Q92621 2012 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 CENPFP49454 3210 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 CCDC154A6NI56 674 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 SLC7A4O43246 635 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 IGLV3-25P01717 112 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 ANXA6P08133 673 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 PRR35P0CG20 571 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 BMP1P13497 986 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 HGFP14210 728 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 HTR1BP28222 390 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 RYKP34925 604 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 PGGT1BP53609 377 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 KRR1Q13601 381 aaKnown RBP15.68■□□□□ 0.1
HMGA1-202ENST00000347617 ZC3H12BQ5HYM0 836 aaKnown RBP15.68■□□□□ 0.1
HMGA1-202ENST00000347617 PERM1Q5SV97 790 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 SLX4IPQ5VYV7 408 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 TIGD7Q6NT04 549 aaPredicted RBP15.68■□□□□ 0.1
HMGA1-202ENST00000347617 OTOP3Q7RTS5 596 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 RNF135Q8IUD6 432 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 LRRC49Q8IUZ0 686 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 HID1Q8IV36 788 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 DPP10Q8N608 796 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 TMBIM1Q969X1 311 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 FBXO44Q9H4M3 255 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 NTN4Q9HB63 628 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 MID1IP1Q9NPA3 183 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 MARCH5Q9NX47 278 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 DNAJB9Q9UBS3 223 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 AP3M1Q9Y2T2 418 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 UGT2A1Q9Y4X1 527 aa15.68■□□□□ 0.1
HMGA1-202ENST00000347617 MN1Q10571 1320 aaPredicted RBP15.68■□□□□ 0.1
HMGA1-202ENST00000347617 FAM234BA2RU67 622 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 M0QX08 132 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 UPK1AO00322 258 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 RGS13O14921 159 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 NUAK1O60285 661 aa15.67■□□□□ 0.1
HMGA1-202ENST00000347617 SOAT2O75908 522 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms