RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ITGB4P16144 1822 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 SH3BGRLO75368 114 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 ERAL1O75616 437 aaKnown RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 EPN2O95208 641 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 ZNF682O95780 498 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 SNRPB2P08579 225 aaKnown RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 TPP2P29144 1249 aaPredicted RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 PNLIPRP1P54315 467 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 SAMD4BQ5PRF9 694 aaKnown RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 SYPL2Q5VXT5 272 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 TXNDC11Q6PKC3 985 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 STK32CQ86UX6 486 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 RHOBTB2Q9BYZ6 727 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 ABCB8Q9NUT2 735 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 IL36AQ9UHA7 158 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 SIX4Q9UIU6 781 aa10.78□□□□□ -0.68
CLCN6-202ENST00000346436 MARF1Q9Y4F3 1742 aaKnown RBP10.78□□□□□ -0.68
CLCN6-202ENST00000346436 CCDC154A6NI56 674 aa10.77□□□□□ -0.68
CLCN6-202ENST00000346436 HNF4AP41235 474 aa10.77□□□□□ -0.68
CLCN6-202ENST00000346436 SLC7A2P52569 658 aa10.77□□□□□ -0.68
CLCN6-202ENST00000346436 ARHGAP1Q07960 439 aa10.77□□□□□ -0.68
CLCN6-202ENST00000346436 SGCBQ16585 318 aa10.77□□□□□ -0.68
CLCN6-202ENST00000346436 FAM151BQ6UXP7 276 aa10.77□□□□□ -0.68
CLCN6-202ENST00000346436 B3GNT6Q6ZMB0 384 aa10.77□□□□□ -0.68
CLCN6-202ENST00000346436 RNF44Q7L0R7 432 aa10.77□□□□□ -0.68
CLCN6-202ENST00000346436 TUBGCP5Q96RT8 1024 aa10.77□□□□□ -0.68
CLCN6-202ENST00000346436 RTKNQ9BST9 563 aa10.77□□□□□ -0.68
CLCN6-202ENST00000346436 POMPQ9Y244 141 aa10.77□□□□□ -0.68
CLCN6-202ENST00000346436 PRR23D1E9PI22 279 aaPredicted RBP10.77□□□□□ -0.69
CLCN6-202ENST00000346436 RRP8O43159 456 aaKnown RBP10.77□□□□□ -0.69
CLCN6-202ENST00000346436 PRR23D2P0DMB1 279 aaPredicted RBP10.77□□□□□ -0.69
CLCN6-202ENST00000346436 MC4RP32245 332 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 GNPDA1P46926 289 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 ACTR3P61158 418 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 MOGSQ13724 837 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 FRG1Q14331 258 aaKnown RBP10.77□□□□□ -0.69
CLCN6-202ENST00000346436 PTPRNQ16849 979 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 AAGABQ6PD74 315 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 PLD3Q8IV08 490 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 HDAC10Q969S8 669 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 NUS1Q96E22 293 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 LDAHQ9H6V9 325 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 HHATLQ9HCP6 504 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 EXOSC4Q9NPD3 245 aaKnown RBP10.77□□□□□ -0.69
CLCN6-202ENST00000346436 NECTIN3Q9NQS3 549 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 FBXW2Q9UKT8 454 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 COL18A1P39060 1754 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 FAM149AA5PLN7 773 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 PTGES3LE9PB15 166 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 CD3EAPO15446 510 aaKnown RBP10.77□□□□□ -0.69
CLCN6-202ENST00000346436 PDE9AO76083 593 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 MT-ND1P03886 318 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 IL12BP29460 328 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 TCEAL1Q15170 157 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 ZNF792Q3KQV3 632 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 PLEKHG6Q3KR16 790 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 TEX44Q53QW1 395 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 UBXN11Q5T124 520 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 HECTD2Q5U5R9 776 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 SLC26A9Q7LBE3 791 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 FGD2Q7Z6J4 655 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 TREML1Q86YW5 311 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 DCBLD1Q8N8Z6 715 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 ADCY4Q8NFM4 1077 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 ZNF461Q8TAF7 563 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 HNRNPABQ99729 332 aaKnown RBP10.77□□□□□ -0.69
CLCN6-202ENST00000346436 RCOR3Q9P2K3 495 aaPredicted RBP10.77□□□□□ -0.69
CLCN6-202ENST00000346436 N6AMT1Q9Y5N5 214 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 PSAT1Q9Y617 370 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 A0A1B0GUL6 1792 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 TRIM38O00635 465 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 PIGRP01833 764 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 CCR10P46092 362 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 ITGADQ13349 1161 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 GRM2Q14416 872 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 RFTN1Q14699 578 aaPredicted RBP10.77□□□□□ -0.69
CLCN6-202ENST00000346436 SF3B4Q15427 424 aaKnown RBP eCLIP10.77□□□□□ -0.695e-7■■■□□ 18.6
CLCN6-202ENST00000346436 FAM187BQ17R55 369 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 PAOXQ6QHF9 649 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 CHST15Q7LFX5 561 aaPredicted RBP10.77□□□□□ -0.69
CLCN6-202ENST00000346436 FAXDC2Q96IV6 333 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 ZFRQ96KR1 1074 aaKnown RBP10.77□□□□□ -0.69
CLCN6-202ENST00000346436 PNPLA8Q9NP80 782 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 DNAAF2Q9NVR5 837 aaKnown RBP10.77□□□□□ -0.69
CLCN6-202ENST00000346436 ETAA1Q9NY74 926 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 RAI2Q9Y5P3 530 aa10.77□□□□□ -0.69
CLCN6-202ENST00000346436 STX16-NPEPL1H3BU86 382 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 C22orf31O95567 290 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 KLF8O95600 359 aaPredicted RBP10.76□□□□□ -0.69
CLCN6-202ENST00000346436 SCNN1AP37088 669 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 SMIM11AP58511 58 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 TEAD2Q15562 447 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 PHTF2Q8N3S3 785 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 TMEM156Q8N614 296 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 OR6K2Q8NGY2 324 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 SPPL2AQ8TCT8 520 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 RAD51AP1Q96B01 352 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 IGSF21Q96ID5 467 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 KXD1Q9BQD3 176 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms