RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 TMEM220Q6QAJ8 160 aa16.09■□□□□ 0.17
CEACAM1-202ENST00000344391 RGS9BPQ6ZS82 235 aa16.09■□□□□ 0.17
CEACAM1-202ENST00000344391 NUDCD3Q8IVD9 361 aa16.09■□□□□ 0.17
CEACAM1-202ENST00000344391 DENND6BQ8NEG7 585 aa16.09■□□□□ 0.17
CEACAM1-202ENST00000344391 PTERQ96BW5 349 aa16.09■□□□□ 0.17
CEACAM1-202ENST00000344391 TOE1Q96GM8 510 aaKnown RBP16.09■□□□□ 0.17
CEACAM1-202ENST00000344391 TSSK1BQ9BXA7 367 aa16.09■□□□□ 0.17
CEACAM1-202ENST00000344391 LGR4Q9BXB1 951 aa16.09■□□□□ 0.17
CEACAM1-202ENST00000344391 TFB2MQ9H5Q4 396 aaKnown RBP16.09■□□□□ 0.17
CEACAM1-202ENST00000344391 SIRPGQ9P1W8 387 aa16.09■□□□□ 0.17
CEACAM1-202ENST00000344391 MID2Q9UJV3 735 aa16.09■□□□□ 0.17
CEACAM1-202ENST00000344391 LATO43561 262 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 LILRB5O75023 590 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 TAC1P20366 129 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 KCNA4P22459 653 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 DGKAP23743 735 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 ALDH3A1P30838 453 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 SIGLEC14Q08ET2 396 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 TTLL9Q3SXZ7 439 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 BCL7AQ4VC05 210 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 ACSBG2Q5FVE4 666 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 NAPRTQ6XQN6 538 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 CAMKK1Q8N5S9 505 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 BEND7Q8N7W2 519 aaPredicted RBP16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 RHEBL1Q8TAI7 183 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 ZNF75CPQ92670 426 aaPredicted RBP16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 FUBP1Q96AE4 644 aaKnown RBP16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 ZNF514Q96K75 400 aaPredicted RBP16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 ZNF317Q96PQ6 595 aaPredicted RBP16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 IER2Q9BTL4 223 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 TPSD1Q9BZJ3 242 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 ALG9Q9H6U8 611 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 WDR26Q9H7D7 661 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 FZD3Q9NPG1 666 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 IKZF3Q9UKT9 509 aa16.08■□□□□ 0.17
CEACAM1-202ENST00000344391 KPNA5O15131 536 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 MYL2P10916 166 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 ZNF8P17098 575 aaPredicted RBP16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 BGNP21810 368 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 CD6P30203 668 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 KCNC1P48547 511 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 RGS4P49798 205 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 CCR5P51681 352 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 GTF2H3Q13889 308 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 GBX1Q14549 363 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 PLEKHS1Q5SXH7 462 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 ZYG11AQ6WRX3 759 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 C10orf107Q8IVU9 208 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 LRRC8CQ8TDW0 803 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 EDAQ92838 391 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 KIAA1191Q96A73 305 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 CCM2Q9BSQ5 444 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 C6orf106Q9H6K1 298 aaPredicted RBP16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 MANSC1Q9H8J5 431 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 PHPT1Q9NRX4 125 aaPredicted RBP16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 DLGAP2Q9P1A6 1054 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 GPR34Q9UPC5 381 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 TMEM98Q9Y2Y6 226 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 OR1A2Q9Y585 309 aa16.08■□□□□ 0.16
CEACAM1-202ENST00000344391 IGHV1OR15-9A0A0B4J2B8 117 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 CCDC189A1A4V9 331 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 GMNCA6NCL1 334 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 TCP11X1B4DZS4 312 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 EIF3FO00303 357 aaPredicted RBP16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 RRP9O43818 475 aaKnown RBP16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 CBSLP0DN79 551 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 CBSP35520 551 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 CXCL12P48061 93 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 SEC24CP53992 1094 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 OR4D1Q15615 310 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 CWF19L1Q69YN2 538 aaKnown RBP16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 CYHR1Q6ZMK1 362 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 MAMSTRQ6ZN01 415 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 TRIM42Q8IWZ5 723 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 RLN3Q8WXF3 142 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 ELMO1Q92556 727 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 ATOH8Q96SQ7 321 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 APOOQ9BUR5 198 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 EPN3Q9H201 632 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 OXSMQ9NWU1 459 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 ANKRD12Q6UB98 2062 aa16.07■□□□□ 0.16
CEACAM1-202ENST00000344391 PLXND1Q9Y4D7 1925 aa16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 TECTAO75443 2155 aa16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 CDC7O00311 574 aa16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 BTN3A1O00481 513 aa16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 KLF11O14901 512 aa16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 CHUKO15111 745 aa16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 NUAK1O60285 661 aa16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 DLX3O60479 287 aa16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 GPC4O75487 556 aa16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 PDGFBP01127 241 aaPredicted RBP16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 IGHV4-34P06331 123 aa16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 FGF3P11487 239 aaPredicted RBP16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 NEFHP12036 1026 aa16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 MYCLP1P12525 358 aaPredicted RBP16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 ENO3P13929 434 aaPredicted RBP16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 HNRNPA2B1P22626 353 aaKnown RBP16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 MAGEA9P43362 315 aa16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 PXNP49023 591 aaPredicted RBP16.06■□□□□ 0.16
CEACAM1-202ENST00000344391 TSNQ15631 228 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms