RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 COX18Q8N8Q8 333 aa11.67□□□□□ -0.54
SHANK2-201ENST00000338508 HMGB4Q8WW32 186 aa11.67□□□□□ -0.54
SHANK2-201ENST00000338508 C15orf41Q9Y2V0 281 aa11.67□□□□□ -0.54
SHANK2-201ENST00000338508 TESMINQ9Y4I5 508 aa11.67□□□□□ -0.54
SHANK2-201ENST00000338508 TRAF6Q9Y4K3 522 aa11.67□□□□□ -0.54
SHANK2-201ENST00000338508 OR14I1A6ND48 311 aa11.67□□□□□ -0.54
SHANK2-201ENST00000338508 CABYRO75952 493 aa11.67□□□□□ -0.54
SHANK2-201ENST00000338508 BNIP2Q12982 314 aa11.67□□□□□ -0.54
SHANK2-201ENST00000338508 GPC2Q8N158 579 aa11.67□□□□□ -0.54
SHANK2-201ENST00000338508 HPF1Q9NWY4 346 aa11.67□□□□□ -0.54
SHANK2-201ENST00000338508 RAI2Q9Y5P3 530 aa11.67□□□□□ -0.54
SHANK2-201ENST00000338508 ZFP37Q9Y6Q3 630 aaPredicted RBP11.67□□□□□ -0.54
SHANK2-201ENST00000338508 SPHKAPQ2M3C7 1700 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 MT-CYBP00156 380 aaPredicted RBP11.66□□□□□ -0.54
SHANK2-201ENST00000338508 ZNF20P17024 532 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 OR3A3P47888 321 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 OR3A2P47893 321 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 SMARCB1Q12824 385 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 AHSA2Q719I0 299 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 GPR151Q8TDV0 419 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 DNAJA3Q96EY1 480 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 ACO2Q99798 780 aaKnown RBP11.66□□□□□ -0.54
SHANK2-201ENST00000338508 GORASP1Q9BQQ3 440 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 IL17RBQ9NRM6 502 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 C2CD2Q9Y426 696 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 PRAMEF33A0A0G2JMD5 474 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 ZNF878C9JN71 531 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 PDPK1O15530 556 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 LIASO43766 372 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 PRAMEF10O60809 474 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 MPSTP25325 297 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 PTDSS1P48651 473 aaKnown RBP11.66□□□□□ -0.54
SHANK2-201ENST00000338508 RPL7AP62424 266 aaKnown RBP11.66□□□□□ -0.54
SHANK2-201ENST00000338508 LIPEQ05469 1076 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 ECHDC2Q86YB7 292 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 ZBTB2Q8N680 514 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 GLIS3Q8NEA6 775 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 IRF2BPLQ9H1B7 796 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 CNTNAP4Q9C0A0 1308 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 CHST10O43529 356 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 ENTPD5O75356 428 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 UROSP10746 265 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 SDC2P34741 201 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 GPD2P43304 727 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 WNT3AP56704 352 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 GCNT1Q02742 428 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 RASGEF1BQ0VAM2 473 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 E2F2Q14209 437 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 LPCAT4Q643R3 524 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 GDF6Q6KF10 455 aaPredicted RBP11.66□□□□□ -0.54
SHANK2-201ENST00000338508 DHDDSQ86SQ9 333 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 OR8H3Q8N146 312 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 RDH11Q8TC12 318 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 MGME1Q9BQP7 344 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 HEPHQ9BQS7 1158 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 SAR1AQ9NR31 198 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 FAM105AQ9NUU6 356 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 ERVK-18Q9QC07 812 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 RSL24D1Q9UHA3 163 aaKnown RBP11.66□□□□□ -0.54
SHANK2-201ENST00000338508 FCF1Q9Y324 198 aaKnown RBP11.66□□□□□ -0.54
SHANK2-201ENST00000338508 AK5Q9Y6K8 562 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 PCDHGA12O60330 932 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 CPNE3O75131 537 aaKnown RBP11.66□□□□□ -0.54
SHANK2-201ENST00000338508 SLC35G6P0C7Q6 338 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 GNSP15586 552 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 CASRP41180 1078 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 ARFRP1Q13795 201 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 SLC9B1Q4ZJI4 515 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 C6orf52Q5T4I8 152 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 RNASEH2BQ5TBB1 312 aaKnown RBP11.66□□□□□ -0.54
SHANK2-201ENST00000338508 MLIPQ5VWP3 458 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 VWA7Q9Y334 891 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 SNX10Q9Y5X0 201 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 CACNA1FO60840 1977 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 SHOX2O60902 331 aaPredicted RBP11.66□□□□□ -0.54
SHANK2-201ENST00000338508 ASGR1P07306 291 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 POLR2JP52435 117 aaKnown RBP11.66□□□□□ -0.54
SHANK2-201ENST00000338508 PRKCDQ05655 676 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 NYAP1Q6ZVC0 841 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 SFRP1Q8N474 314 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 ANKRD52Q8NB46 1076 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 LRRN4CLQ8ND94 238 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 CYP2S1Q96SQ9 504 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 BLOC1S4Q9NUP1 217 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 PCDHGB5Q9Y5G0 923 aa11.66□□□□□ -0.54
SHANK2-201ENST00000338508 J3QRK9 145 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 BCKDKO14874 412 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 PAPSS2O95340 614 aaPredicted RBP11.65□□□□□ -0.54
SHANK2-201ENST00000338508 LDOC1O95751 146 aaPredicted RBP11.65□□□□□ -0.54
SHANK2-201ENST00000338508 ACVR2AP27037 513 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 ASMTP46597 345 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 BST1Q10588 318 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 USP50Q70EL3 339 aaPredicted RBP11.65□□□□□ -0.54
SHANK2-201ENST00000338508 SPATC1Q76KD6 591 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 GALNT11Q8NCW6 608 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 OR2T12Q8NG77 320 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 ASB12Q8WXK4 309 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 WDR55Q9H6Y2 383 aaPredicted RBP11.65□□□□□ -0.54
SHANK2-201ENST00000338508 TCF7L1Q9HCS4 588 aa11.65□□□□□ -0.54
SHANK2-201ENST00000338508 GDAP2Q9NXN4 497 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms