RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ADGRG2Q8IZP9 1017 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 EXOSC8Q96B26 276 aaKnown RBP14.84□□□□□ -0.03
C9orf47-201ENST00000334490 SPHK2Q9NRA0 654 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 EXD2Q9NVH0 621 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 N6AMT1Q9Y5N5 214 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 MYH1P12882 1939 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 RB1P06400 928 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 TCF3P15923 654 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 MAPK12P53778 367 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 FOXM1Q08050 763 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 C1orf220Q5T0J3 134 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 GPRIN1Q7Z2K8 1008 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 ZNF607Q96SK3 696 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 ZIC5Q96T25 663 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 TMEM109Q9BVC6 243 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 CNTN6Q9UQ52 1028 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 UBR2Q8IWV8 1755 aa14.84□□□□□ -0.03
C9orf47-201ENST00000334490 H3BNH8 94 aa14.83□□□□□ -0.03
C9orf47-201ENST00000334490 OAZ2O95190 189 aa14.83□□□□□ -0.03
C9orf47-201ENST00000334490 TGDSO95455 350 aa14.83□□□□□ -0.03
C9orf47-201ENST00000334490 ITGAXP20702 1163 aa14.83□□□□□ -0.03
C9orf47-201ENST00000334490 FGFR3P22607 806 aa14.83□□□□□ -0.03
C9orf47-201ENST00000334490 RING1Q06587 406 aa14.83□□□□□ -0.03
C9orf47-201ENST00000334490 FAM46DQ8NEK8 389 aa14.83□□□□□ -0.03
C9orf47-201ENST00000334490 HAPLN2Q9GZV7 340 aa14.83□□□□□ -0.03
C9orf47-201ENST00000334490 PDP2Q9P2J9 529 aa14.83□□□□□ -0.03
C9orf47-201ENST00000334490 HEBP2Q9Y5Z4 205 aa14.83□□□□□ -0.03
C9orf47-201ENST00000334490 BTAF1O14981 1849 aa14.83□□□□□ -0.03
C9orf47-201ENST00000334490 ITPKBP27987 946 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 ARMCX6Q7L4S7 300 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 TDRPQ86YL5 185 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 PQLC3Q8N755 202 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 ZNF784Q8NCA9 323 aaPredicted RBP14.83□□□□□ -0.04
C9orf47-201ENST00000334490 XAGE5Q8WWM1 108 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 BTBD9Q96Q07 612 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 PCBD2Q9H0N5 130 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 PCDHGA11Q9Y5H2 935 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 C2orf78A6NCI8 922 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 PDE9AO76083 593 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 UROSP10746 265 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 NT5EP21589 574 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 PROZP22891 400 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 PSMB9P28065 219 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 LPCAT2Q7L5N7 544 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 MRPL10Q7Z7H8 261 aaKnown RBP14.83□□□□□ -0.04
C9orf47-201ENST00000334490 UNC5BQ8IZJ1 945 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 PHF10Q8WUB8 498 aaKnown RBP14.83□□□□□ -0.04
C9orf47-201ENST00000334490 PPM1MQ96MI6 270 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 NPAS2Q99743 824 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 POLR1BQ9H9Y6 1135 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 SIRPGQ9P1W8 387 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 EGFL7Q9UHF1 273 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 TMEM59LQ9UK28 342 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 LYVE1Q9Y5Y7 322 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 CCNFP41002 786 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 INO80DQ53TQ3 878 aaPredicted RBP14.83□□□□□ -0.04
C9orf47-201ENST00000334490 LRRC66Q68CR7 880 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 SLC30A9Q6PML9 568 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 SPESP1Q6UW49 350 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 ARHGAP36Q6ZRI8 547 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 PRSS58Q8IYP2 241 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 CPSF7Q8N684 471 aaKnown RBP14.83□□□□□ -0.04
C9orf47-201ENST00000334490 SLC43A3Q8NBI5 491 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 C1orf74Q96LT6 269 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 SLC17A6Q9P2U8 582 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 LGALS13Q9UHV8 139 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 GMEB2Q9UKD1 530 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 PKD1L3Q7Z443 1732 aa14.83□□□□□ -0.04
C9orf47-201ENST00000334490 PTGES3LE9PB15 166 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 ZNF30P17039 623 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 ITGA2P17301 1181 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 DYNC1I2Q13409 638 aaKnown RBP14.82□□□□□ -0.04
C9orf47-201ENST00000334490 CLLU1OSQ5K130 101 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 C15orf39Q6ZRI6 1047 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 GK5Q6ZS86 529 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 P2RY13Q9BPV8 354 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 LMAN2LQ9H0V9 348 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 FBXW2Q9UKT8 454 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 MAN1A2O60476 641 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 FAM58BPP0C7Q3 252 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 PLA2G16P53816 162 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 KLF10Q13118 480 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 LRRC32Q14392 662 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 ALG11Q2TAA5 492 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 B3GNT9Q6UX72 402 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 LRRTM4Q86VH4 590 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 EPHX4Q8IUS5 362 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 MAGEE2Q8TD90 523 aaPredicted RBP14.82□□□□□ -0.04
C9orf47-201ENST00000334490 TGM5O43548 720 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 SCN2BO60939 215 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 SLC25A12O75746 678 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 ALDH4A1P30038 563 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 FEN1P39748 380 aaKnown RBP14.82□□□□□ -0.04
C9orf47-201ENST00000334490 CLCNKAP51800 687 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 BNIP2Q12982 314 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 ZDHHC24Q6UX98 284 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 MACC1Q6ZN28 852 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 COMMD2Q86X83 199 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 OFCC1Q8IZS5 231 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 CLDN19Q8N6F1 224 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms