RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 TMA16Q96EY4 203 aaKnown RBP16.78■□□□□ 0.28
PDCD1-201ENST00000334409 SLC39A8Q9C0K1 460 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 TDP1Q9NUW8 608 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 CLEC1BQ9P126 229 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 ANKRD6Q9Y2G4 727 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 MYOFQ9NZM1 2061 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 ZNF197O14709 1029 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 S100BP04271 92 aaPredicted RBP16.78■□□□□ 0.28
PDCD1-201ENST00000334409 GMPRP36959 345 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 KRT6CP48668 564 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 RPL14P50914 215 aaKnown RBP16.78■□□□□ 0.28
PDCD1-201ENST00000334409 NRG1Q02297 640 aaPredicted RBP16.78■□□□□ 0.28
PDCD1-201ENST00000334409 ADAM15Q13444 863 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 CCNYL2Q5T2Q4 361 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 Q6ZNB5 142 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 PARP8Q8N3A8 854 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 RTL3Q8N8U3 475 aaKnown RBP16.78■□□□□ 0.28
PDCD1-201ENST00000334409 DNAAF3Q8N9W5 541 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 ABHD11Q8NFV4 315 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 HDAC11Q96DB2 347 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 VMP1Q96GC9 406 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 TXNDC15Q96J42 360 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 AGAP2Q99490 1192 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 TRIM15Q9C019 465 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 OXSMQ9NWU1 459 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 NSMCE4AQ9NXX6 385 aa16.78■□□□□ 0.28
PDCD1-201ENST00000334409 RBMX2Q9Y388 322 aaKnown RBP16.78■□□□□ 0.28
PDCD1-201ENST00000334409 IGLV3-10A0A075B6K4 115 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 DRGXA6NNA5 263 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 NOTOA8MTQ0 251 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 AP3B1O00203 1094 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 FGF10O15520 208 aaPredicted RBP16.77■□□□□ 0.28
PDCD1-201ENST00000334409 NUAK1O60285 661 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 DEAF1O75398 565 aaPredicted RBP16.77■□□□□ 0.28
PDCD1-201ENST00000334409 FSHRP23945 695 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 VIPR2P41587 438 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 CDC20Q12834 499 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 PRKAA1Q13131 559 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 OLIG2Q13516 323 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 SMAD1Q15797 465 aaKnown RBP16.77■□□□□ 0.28
PDCD1-201ENST00000334409 SAMD4BQ5PRF9 694 aaKnown RBP16.77■□□□□ 0.28
PDCD1-201ENST00000334409 GPR149Q86SP6 731 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 C11orf74Q86VG3 221 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 KCNMB4Q86W47 210 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 ARHGAP12Q8IWW6 846 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 SDR16C5Q8N3Y7 309 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 LEMD2Q8NC56 503 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 OR52K2Q8NGK3 314 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 LPGAT1Q92604 370 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 VAT1Q99536 393 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 GATA5Q9BWX5 397 aaPredicted RBP16.77■□□□□ 0.28
PDCD1-201ENST00000334409 IL22Q9GZX6 179 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 NAA50Q9GZZ1 169 aaKnown RBP16.77■□□□□ 0.28
PDCD1-201ENST00000334409 NOL6Q9H6R4 1146 aaKnown RBP16.77■□□□□ 0.28
PDCD1-201ENST00000334409 SIAEQ9HAT2 523 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 CPNE5Q9HCH3 593 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 DZANK1Q9NVP4 752 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 PCDHGA7Q9Y5G6 932 aa16.77■□□□□ 0.28
PDCD1-201ENST00000334409 E2F8A0AVK6 867 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 ILVBLA1L0T0 632 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 TCAF2A6NFQ2 919 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 CLOCKO15516 846 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 ZBTB24O43167 697 aaPredicted RBP16.76■□□□□ 0.27
PDCD1-201ENST00000334409 USP12O75317 370 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 RHOQP17081 205 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 OR1E1P30953 314 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 CD68P34810 354 aaPredicted RBP16.76■□□□□ 0.27
PDCD1-201ENST00000334409 IDUAP35475 653 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 LEPRP48357 1165 aaKnown RBP16.76■□□□□ 0.27
PDCD1-201ENST00000334409 ZNF135P52742 658 aaPredicted RBP16.76■□□□□ 0.27
PDCD1-201ENST00000334409 IRF9Q00978 393 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 ZYG11AQ6WRX3 759 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 PLEKHG7Q6ZR37 379 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 FGF13Q92913 245 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 ATXN7L3BQ96GX2 97 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 LRRC3BQ96PB8 259 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 BCL7BQ9BQE9 202 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 LINC00597Q9H2U6 94 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 AKIP1Q9NQ31 210 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 SACM1LQ9NTJ5 587 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 LSM7Q9UK45 103 aaKnown RBP16.76■□□□□ 0.27
PDCD1-201ENST00000334409 SATB2Q9UPW6 733 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.76■□□□□ 0.27
PDCD1-201ENST00000334409 STX16-NPEPL1H3BU86 382 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 TBL1XO60907 577 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 DNAJB5O75953 348 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 CAPGP40121 348 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 OPRL1P41146 370 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 ATXN3P54252 364 aaPredicted RBP16.76■□□□□ 0.27
PDCD1-201ENST00000334409 TPTEP56180 551 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 ANO4Q32M45 955 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 TMEM184AQ6ZMB5 413 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 HEATR4Q86WZ0 1026 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.76■□□□□ 0.27
PDCD1-201ENST00000334409 ZUFSPQ96AP4 578 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 MFSD3Q96ES6 412 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 VPS39Q96JC1 886 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 SLC45A3Q96JT2 553 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 GPR22Q99680 433 aa16.76■□□□□ 0.27
PDCD1-201ENST00000334409 MLPHQ9BV36 600 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms