RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 HMX2A2RU54 273 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 CRY1Q16526 586 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 PRSS36Q5K4E3 855 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 MFSD6LQ8IWD5 586 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 TRIM42Q8IWZ5 723 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 PPP1R16AQ96I34 528 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 MPP4Q96JB8 637 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 LENG8Q96PV6 779 aaPredicted RBP15.7■□□□□ 0.1
PDGFB-201ENST00000331163 SYNDIG1Q9H7V2 258 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 PFDN4Q9NQP4 134 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 UPK3BL1B0FP48 263 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 UPK3BL2E5RIL1 263 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 TM9SF1O15321 606 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 CLCN5P51795 746 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 DGKEP52429 567 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 AP2B1P63010 937 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 SLC25A3Q00325 362 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 ZNF33AQ06730 810 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 PEX6Q13608 980 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 C18orf21Q32NC0 220 aaPredicted RBP15.69■□□□□ 0.1
PDGFB-201ENST00000331163 PARS2Q7L3T8 475 aaKnown RBP15.69■□□□□ 0.1
PDGFB-201ENST00000331163 TRIM73Q86UV7 250 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 GPSM1Q86YR5 675 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 UHRF1Q96T88 793 aaPredicted RBP15.69■□□□□ 0.1
PDGFB-201ENST00000331163 MRPL46Q9H2W6 279 aaKnown RBP15.69■□□□□ 0.1
PDGFB-201ENST00000331163 PPCSQ9HAB8 311 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 HPS4Q9NQG7 708 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 SAR1AQ9NR31 198 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 STX18Q9P2W9 335 aaKnown RBP15.69■□□□□ 0.1
PDGFB-201ENST00000331163 COPG2Q9UBF2 871 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 ABCA7Q8IZY2 2146 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 C2CD4DB7Z1M9 353 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 SPECC1L-ADORA2AF8WAN1 911 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 S1PR4O95977 384 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 HNF4AP41235 474 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 UBAP2LQ14157 1087 aaKnown RBP15.69■□□□□ 0.1
PDGFB-201ENST00000331163 MMEL1Q495T6 779 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 SPATA24Q86W54 205 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 TTYH1Q9H313 450 aaPredicted RBP15.69■□□□□ 0.1
PDGFB-201ENST00000331163 ACTL7BQ9Y614 415 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 RALGAPA2Q2PPJ7 1873 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 C5orf67F2Z3F1 127 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 OLFM2O95897 454 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 LHCGRP22888 699 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 CNTFP26441 200 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 STC1P52823 247 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 TRIP10Q15642 601 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 DBN1Q16643 649 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 GPRC6AQ5T6X5 926 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 SATL1Q86VE3 508 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 CDYL2Q8N8U2 506 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 TRAPPC9Q96Q05 1148 aa15.69■□□□□ 0.1
PDGFB-201ENST00000331163 GATA5Q9BWX5 397 aaPredicted RBP15.69■□□□□ 0.1
PDGFB-201ENST00000331163 LOC285095A0A1B0GVY8 99 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 TCN1P20061 433 aaPredicted RBP15.68■□□□□ 0.1
PDGFB-201ENST00000331163 CRABP2P29373 138 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 HSPA7P48741 367 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 POLD2P49005 469 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 AGTR2P50052 363 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 ARL13AQ5H913 290 aaPredicted RBP15.68■□□□□ 0.1
PDGFB-201ENST00000331163 C11orf96Q7Z7L8 435 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 ECSITQ9BQ95 431 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 EBF4Q9BQW3 602 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 ILKAPQ9H0C8 392 aaPredicted RBP15.68■□□□□ 0.1
PDGFB-201ENST00000331163 GIMAP2Q9UG22 337 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 VPS13AQ96RL7 3174 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 TRANK1O15050 2925 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 SORBS2O94875 1100 aaKnown RBP15.68■□□□□ 0.1
PDGFB-201ENST00000331163 STATHP02808 62 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 MPOP05164 745 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 BPGMP07738 259 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 OR56A5P0C7T3 313 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 SLC35E2BP0CK96 405 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 CLDN2P57739 230 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 CACNG1Q06432 222 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 NFATC2Q13469 925 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 MED21Q13503 144 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 LIN52Q52LA3 116 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 ZNF805Q5CZA5 627 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 SEL1L3Q68CR1 1132 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 PTCRAQ6ISU1 281 aaPredicted RBP15.68■□□□□ 0.1
PDGFB-201ENST00000331163 PHACTR4Q8IZ21 702 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 RBFAQ8N0V3 343 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 PIH1D2Q8WWB5 315 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 JPH3Q8WXH2 748 aaPredicted RBP15.68■□□□□ 0.1
PDGFB-201ENST00000331163 OTUB2Q96DC9 234 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 CATSPER2Q96P56 530 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 SYTL2Q9HCH5 934 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 CLEC1BQ9P126 229 aa15.68■□□□□ 0.1
PDGFB-201ENST00000331163 GREB1Q4ZG55 1949 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 WNT9AO14904 365 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 PRPF4O43172 522 aaKnown RBP eCLIP15.67■□□□□ 0.1
PDGFB-201ENST00000331163 GREM1O60565 184 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 MAOBP27338 520 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 CPSF6Q16630 551 aaKnown RBP eCLIP15.67■□□□□ 0.1
PDGFB-201ENST00000331163 CTC1Q2NKJ3 1217 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 AFMIDQ63HM1 303 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 FAM45BPQ6NSW5 357 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 TREML1Q86YW5 311 aa15.67■□□□□ 0.1
PDGFB-201ENST00000331163 RAVER1Q8IY67 606 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms