RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 ELMO1Q92556 727 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 BIRC7Q96CA5 298 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 MRGPRX2Q96LB1 330 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 BTBD3Q9Y2F9 522 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 LCHNA4D1U4 455 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 SUV39H1O43463 412 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 RSL1D1O76021 490 aaKnown RBP14.57□□□□□ -0.08
TCOF1-201ENST00000323668 FADS2O95864 444 aaKnown RBP14.57□□□□□ -0.08
TCOF1-201ENST00000323668 SNRPD1P62314 119 aaKnown RBP14.57□□□□□ -0.08
TCOF1-201ENST00000323668 SMARCB1Q12824 385 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 PHKG1Q16816 387 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 SPATS1Q496A3 300 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 XKR5Q6UX68 686 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 LINGO4Q6UY18 593 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 C11orf96Q7Z7L8 435 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 SLC15A3Q8IY34 581 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 TSPEARQ8WU66 669 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 ATL1Q8WXF7 558 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 TMBIM1Q969X1 311 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 REPS1Q96D71 796 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 MYO19Q96H55 970 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 CDK15Q96Q40 435 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 PDP1Q9P0J1 537 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-201ENST00000323668 NDUFS2O75306 463 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 CLDN9O95484 217 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 CDC42P60953 191 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 TPGS1Q6ZTW0 290 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 GPRIN1Q7Z2K8 1008 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 C11orf74Q86VG3 221 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 TTC30BQ8N4P2 665 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 HJURPQ8NCD3 748 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-201ENST00000323668 MTERF3Q96E29 417 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 IL12RB2Q99665 862 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 AHSPQ9NZD4 102 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 TMEM9Q9P0T7 183 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 MYH9P35579 1960 aaKnown RBP14.57□□□□□ -0.08
TCOF1-201ENST00000323668 TCAF2A6NFQ2 919 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 KPNA5O15131 536 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 CDK14O94921 469 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 ECT2LQ008S8 904 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 INAQ16352 499 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 VARS2Q5ST30 1063 aaKnown RBP14.56□□□□□ -0.08
TCOF1-201ENST00000323668 P2RY8Q86VZ1 359 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 LIX1Q8N485 282 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 ZFP37Q9Y6Q3 630 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-201ENST00000323668 PRAMEF1O95521 474 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 GSTM1P09488 218 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 STC1P52823 247 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 DGKQP52824 942 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 TRIM32Q13049 653 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 ZNF829Q3KNS6 432 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-201ENST00000323668 UBE2R2Q712K3 238 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-201ENST00000323668 NT5C1B-RDH14C9J2C7 533 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 MAFKO60675 156 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 PKDCCQ504Y2 493 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 XKR6Q5GH73 641 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 RBM48Q5RL73 367 aaKnown RBP14.56□□□□□ -0.08
TCOF1-201ENST00000323668 ELMSAN1Q6PJG2 1045 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 SLC2A7Q6PXP3 512 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 RASAL3Q86YV0 1011 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 ISOC1Q96CN7 298 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 KCTD5Q9NXV2 234 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 PSME2Q9UL46 239 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 CORO2BQ9UQ03 480 aa14.56□□□□□ -0.08
TCOF1-201ENST00000323668 A0A1B0GVM2 712 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ZBTB42B2RXF5 422 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 LZTS3O60299 673 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ATP6V1G1O75348 118 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 CORO1AP31146 461 aaKnown RBP14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ANXA11P50995 505 aaKnown RBP14.55□□□□□ -0.08
TCOF1-201ENST00000323668 UNC50Q53HI1 259 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ERICH5Q6P6B1 374 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 TMC5Q6UXY8 1006 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 HACD2Q6Y1H2 254 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 C14orf80Q86SX3 495 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ANKRD46Q86W74 232 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ZBTB2Q8N680 514 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 MAGEB10Q96LZ2 347 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-201ENST00000323668 DERL2Q9GZP9 239 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 HNRNPCL2B2RXH8 293 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 PPIBP23284 216 aaKnown RBP14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ACVRL1P37023 503 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ALDH9A1P49189 494 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ZDHHC21Q8IVQ6 265 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ZNF420Q8TAQ5 688 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ZFYVE19Q96K21 471 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ZNF599Q96NL3 588 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 OLFM1Q99784 485 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 TMEM245Q9H330 911 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 C1orf109Q9NX04 203 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ANKRD12Q6UB98 2062 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 GLYATL1P3A0A0U1RQE8 302 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ENPP3O14638 875 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 ITGA2P17301 1181 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 OR1D2P34982 312 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 RPIAP49247 311 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 PTPRCAPQ14761 206 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 SULT1C3Q6IMI6 304 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 PRR23BQ6ZRT6 265 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms