RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 OTOFQ9HC10 1997 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 NUDT19A8MXV4 375 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 RSL1D1O76021 490 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 DLGAP3O95886 979 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 PTTG1O95997 202 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 STARP49675 285 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ALDH5A1P51649 535 aaPredicted RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 MAP2K6P52564 334 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 KRT77Q7Z794 578 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 STX12Q86Y82 276 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 CFAP206Q8IYR0 622 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 SFXN2Q96NB2 322 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 COPS8Q99627 209 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 SPRTNQ9H040 489 aaPredicted RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 GPN2Q9H9Y4 310 aaPredicted RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 A0A1W2PP18 115 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 LILRB3O75022 631 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 FMO1Q01740 532 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 RHDQ02161 417 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 MANEALQ5VSG8 457 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 LRRC57Q8N9N7 239 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 DNAJC19Q96DA6 116 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 CNTN3Q9P232 1028 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ZNHIT2Q9UHR6 403 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 NPIPA5A0A0B4J1W7 369 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 MAGEB17A8MXT2 336 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 SEC22BO75396 215 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 HLA-DPB1P04440 258 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 IFNW1P05000 195 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 USP17L7P0C7H9 530 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 MSR1P21757 451 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 KCTD19Q17RG1 926 aaPredicted RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 BAP1Q92560 729 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 SLCO5A1Q9H2Y9 848 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 TRIM36Q9NQ86 728 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 MRPL17Q9NRX2 175 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 RASSF1Q9NS23 344 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 XPR1Q9UBH6 696 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 DUSP12Q9UNI6 340 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 FIS1Q9Y3D6 152 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 PCDHA2Q9Y5H9 948 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 MEGF11A6BM72 1044 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 PRKAB2O43741 272 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 SEC24CP53992 1094 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 PTAR1Q7Z6K3 402 aaPredicted RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 MAT2BQ9NZL9 334 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 FOXO6A8MYZ6 492 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 TP73O15350 636 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 WBP4O75554 376 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 KAT7O95251 611 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 RASGRP1O95267 797 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 SLC35G6P0C7Q6 338 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 SMSP52788 366 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 GHRHRQ02643 423 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ARL9Q6T311 187 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 RPTNQ6XPR3 784 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ATG14Q6ZNE5 492 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 MINDY1Q8N5J2 469 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 C1orf52Q8N6N3 182 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 UHMK1Q8TAS1 419 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 KCNJ9Q92806 393 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 USP7Q93009 1102 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 OR2B2Q9GZK3 357 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 SEMA6BQ9H3T3 888 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 FOLH1BQ9HBA9 442 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 H3BN98 237 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 PRAMEF12O95522 483 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 RHOAP61586 193 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 MELKQ14680 651 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 CA9Q16790 459 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SLC35F1Q5T1Q4 408 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 KANK2Q63ZY3 851 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ANKRD26P1Q6NSI1 321 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TSPYL5Q86VY4 417 aaPredicted RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 SCML4Q8N228 414 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SELENOMQ8WWX9 145 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 PDCD2LQ9BRP1 358 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 INPP5EQ9NRR6 644 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 OR14I1A6ND48 311 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 NDST3O95803 873 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 CRISP3P54108 245 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 EEFSECP57772 596 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 DYNLL1P63167 89 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 MOB2Q70IA6 237 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SSX8Q7RTT4 187 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SERINC5Q86VE9 423 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SLC44A3Q8N4M1 653 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ZNF540Q8NDQ6 660 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 KIFC1Q9BW19 673 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 HIPK3Q9H422 1215 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 CDH22Q9UJ99 828 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 LRP5LA4QPB2 252 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 GMFGO60234 142 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 KHDRBS3O75525 346 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 PLEKHS1Q5SXH7 462 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 CELF1Q92879 486 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 NODALQ96S42 347 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 RETP07949 1114 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TSFMP43897 325 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 THOP1P52888 689 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms