RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ITLN2Q8WWU7 325 aaPredicted RBP11.56□□□□□ -0.56
SMIM4-201ENST00000307106 IP6K3Q96PC2 410 aa11.56□□□□□ -0.56
SMIM4-201ENST00000307106 PEBP4Q96S96 227 aa11.56□□□□□ -0.56
SMIM4-201ENST00000307106 TIMM29Q9BSF4 260 aa11.56□□□□□ -0.56
SMIM4-201ENST00000307106 NT5MQ9NPB1 228 aa11.56□□□□□ -0.56
SMIM4-201ENST00000307106 PCMTD2Q9NV79 361 aa11.56□□□□□ -0.56
SMIM4-201ENST00000307106 TRIM10Q9UDY6 481 aa11.56□□□□□ -0.56
SMIM4-201ENST00000307106 PCSK1NQ9UHG2 260 aa11.56□□□□□ -0.56
SMIM4-201ENST00000307106 NOVA2Q9UNW9 492 aaKnown RBP11.56□□□□□ -0.56
SMIM4-201ENST00000307106 CHKBQ9Y259 395 aa11.56□□□□□ -0.56
SMIM4-201ENST00000307106 PADI2Q9Y2J8 665 aa11.56□□□□□ -0.56
SMIM4-201ENST00000307106 SNRNP200O75643 2136 aaKnown RBP11.56□□□□□ -0.56
SMIM4-201ENST00000307106 PES1O00541 588 aaKnown RBP11.55□□□□□ -0.56
SMIM4-201ENST00000307106 PEX12O00623 359 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 ZBTB11O95625 1053 aaPredicted RBP11.55□□□□□ -0.56
SMIM4-201ENST00000307106 HTR1EP28566 365 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 CDH6P55285 790 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 DPYSQ14117 519 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 PLCL1Q15111 1095 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 TPD52L1Q16890 204 aaPredicted RBP11.55□□□□□ -0.56
SMIM4-201ENST00000307106 CLEC16AQ2KHT3 1053 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 PTCHD3Q3KNS1 767 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 VWA2Q5GFL6 755 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 ZNF569Q5MCW4 686 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 SPOCD1Q6ZMY3 1216 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 BNC2Q6ZN30 1099 aaPredicted RBP11.55□□□□□ -0.56
SMIM4-201ENST00000307106 ATPAF2Q8N5M1 289 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 LYSMD1Q96S90 227 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 WDR77Q9BQA1 342 aaPredicted RBP11.55□□□□□ -0.56
SMIM4-201ENST00000307106 TUBGCP2Q9BSJ2 902 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 FANCEQ9HB96 536 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 SOHLH2Q9NX45 425 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 DTLQ9NZJ0 730 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 CWC15Q9P013 229 aaKnown RBP11.55□□□□□ -0.56
SMIM4-201ENST00000307106 WDR37Q9Y2I8 494 aa11.55□□□□□ -0.56
SMIM4-201ENST00000307106 A0A1W2PQJ5 194 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 RGSL1A5PLK6 1076 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 OR5K3A6NET4 321 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 C9J4A7 227 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 DDX3YO15523 660 aaKnown RBP11.54□□□□□ -0.56
SMIM4-201ENST00000307106 LDB2O43679 373 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 PSMA2P25787 234 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 SOX5P35711 763 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 HALP42357 657 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 TSFMP43897 325 aaKnown RBP11.54□□□□□ -0.56
SMIM4-201ENST00000307106 HCAR3P49019 387 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 IHHQ14623 411 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 HIF1AQ16665 826 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 ZNF630Q2M218 657 aaPredicted RBP11.54□□□□□ -0.56
SMIM4-201ENST00000307106 ANKRD20A8PQ5CZ79 823 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 ALS2CLQ60I27 953 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 ZNF547Q8IVP9 402 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 ZNF295-AS1Q8N0V1 137 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMIM4-201ENST00000307106 LPCAT1Q8NF37 534 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 CCHCR1Q8TD31 782 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 PPP4R1Q8TF05 950 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 RELTQ969Z4 430 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 DHRS4Q9BTZ2 278 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 SPATA16Q9BXB7 569 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 TLR10Q9BXR5 811 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 TDRD1Q9BXT4 1180 aaKnown RBP11.54□□□□□ -0.56
SMIM4-201ENST00000307106 SLC7A5P2Q9GIP4 190 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 POLR1EQ9GZS1 481 aaKnown RBP11.54□□□□□ -0.56
SMIM4-201ENST00000307106 ACTR5Q9H9F9 607 aaPredicted RBP11.54□□□□□ -0.56
SMIM4-201ENST00000307106 SEPT11Q9NVA2 429 aaKnown RBP11.54□□□□□ -0.56
SMIM4-201ENST00000307106 HRASLS2Q9NWW9 162 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 BTRCQ9Y297 605 aa11.54□□□□□ -0.56
SMIM4-201ENST00000307106 SPG11Q96JI7 2443 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 A0A1B0GTL3 188 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 MASP2O00187 686 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 MTX2O75431 263 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 KLF7O75840 302 aaPredicted RBP11.53□□□□□ -0.56
SMIM4-201ENST00000307106 LCA5LO95447 670 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 PRLP01236 227 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 IGHEP01854 428 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 HOXB4P17483 251 aaPredicted RBP11.53□□□□□ -0.56
SMIM4-201ENST00000307106 CYP2A7P20853 494 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 AMPD1P23109 780 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 HADHAP40939 763 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 ZNF135P52742 658 aaPredicted RBP11.53□□□□□ -0.56
SMIM4-201ENST00000307106 SOX8P57073 446 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 KRTAP10-9P60411 292 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 DSC2Q02487 901 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 CDC16Q13042 620 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 SSPNQ14714 243 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 HSP90AA4PQ58FG1 418 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 FBXO38Q6PIJ6 1188 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 TMCO3Q6UWJ1 677 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 MRGPRGQ86SM5 289 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 CDH24Q86UP0 819 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 OOSP2Q86WS3 158 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 TEX26Q8N6G2 289 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 GLYATL1Q969I3 302 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 SLX1AQ9BQ83 275 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 GANQ9H2C0 597 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 ZWILCHQ9H900 591 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 PCDH9Q9HC56 1237 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 ETNK2Q9NVF9 386 aa11.53□□□□□ -0.56
SMIM4-201ENST00000307106 P4HTMQ9NXG6 502 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms