RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 VPS35Q96QK1 796 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 FAM83CQ9BQN1 747 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 RHOJQ9H4E5 214 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 DCLRE1BQ9H816 532 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 ERVK-5Q9HDB9 667 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 ZNF879B4DU55 563 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 H0Y858 1186 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 TMEM189-UBE2V1I3L0A0 370 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 M0R2N6 131 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 LIASO43766 372 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 RGS20O76081 388 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 NQO1P15559 274 aaKnown RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 ABL2P42684 1182 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 DNASE1L1P49184 302 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 CCT3P49368 545 aaKnown RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 SWI5Q1ZZU3 235 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 P4HA3Q7Z4N8 544 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 TMEM110Q86TL2 294 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 UBR7Q8N806 425 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 HERC2P3Q9BVR0 1158 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 BHLHE41Q9C0J9 482 aaPredicted RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 GPATCH2LQ9NWQ4 482 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 GLS2Q9UI32 602 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 CAPN6Q9Y6Q1 641 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 DCLK1O15075 740 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 PGRMC2O15173 223 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 AP2A1O95782 977 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 ALPIP09923 528 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 FOSL2P15408 326 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 BUD31P41223 144 aaPredicted RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 CASP6P55212 293 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 C15orf59Q2T9L4 293 aaPredicted RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 AKIRIN2Q53H80 203 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 FAM91A1Q658Y4 838 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 CATSPER2Q96P56 530 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 MINDY3Q9H8M7 445 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 CHMP1AQ9HD42 196 aaPredicted RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 L1RE1Q9UN81 338 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 RAI2Q9Y5P3 530 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 MYOFQ9NZM1 2061 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 CLOCKO15516 846 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 SLC28A2O43868 658 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 ACRP10323 421 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 RBL1P28749 1068 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 PTGER3P43115 390 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 RAB10P61026 200 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 CBX3Q13185 183 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 DNAJC14Q6Y2X3 702 aaPredicted RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 ZFRQ96KR1 1074 aaKnown RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 IL36AQ9UHA7 158 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 GSSP48637 474 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 RNF43Q68DV7 783 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 FIP1L1Q6UN15 594 aaKnown RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 IRF2BP2Q7Z5L9 587 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 XYLT1Q86Y38 959 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 RAVER1Q8IY67 606 aaKnown RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 MTFMTQ96DP5 389 aaKnown RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 SIPA1Q96FS4 1042 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 NKIRAS2Q9NYR9 191 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 IGSF9Q9P2J2 1179 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 ALAS2P22557 587 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 EIF2S3P41091 472 aaKnown RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 NRIP1P48552 1158 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 TAF1AQ15573 450 aaPredicted RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 UPP1Q16831 310 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 VITQ6UXI7 678 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 OFCC1Q8IZS5 231 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 GABRQQ9UN88 632 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 PCDHGA3Q9Y5H0 932 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 RGSL1A5PLK6 1076 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 A8MX80 341 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 MRASO14807 208 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 VEGFDO43915 354 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 SMNDC1O75940 238 aaKnown RBP eCLIP8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 CAPGP40121 348 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 CASP9P55211 416 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 FCHO2Q0JRZ9 810 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 SF1Q15637 639 aaKnown RBP8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 DPYSL2Q16555 572 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 FSTL5Q8N475 847 aaPredicted RBP8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 ZNF276Q8N554 614 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 ANKFN1Q8N957 763 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 NKD2Q969F2 451 aaPredicted RBP8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 RAD51AP1Q96B01 352 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 RNF31Q96EP0 1072 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 PCDH18Q9HCL0 1135 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 PI15O43692 258 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 OR5F1O95221 314 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 CD63P08962 238 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 IL12BP29460 328 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 CXCR3P49682 368 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 NUMBP49757 651 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 WNT3AP56704 352 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 ELAVL3Q14576 367 aaKnown RBP8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 KLHL26Q53HC5 615 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 FAM124AQ86V42 546 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 LIX1Q8N485 282 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 POMKQ9H5K3 350 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 CDHR5Q9HBB8 845 aa8.24□□□□□ -1.09
PCDHB1-201ENST00000306549 MYBPHLA2RUH7 354 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms