RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 PIK3CGP48736 1102 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 FCGRTP55899 365 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 TWF1Q12792 350 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 TRAF2Q12933 501 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 ZIK1Q3SY52 487 aaPredicted RBP14.94□□□□□ -0.02
CSDC2-201ENST00000306149 RNF219Q5W0B1 726 aaPredicted RBP14.94□□□□□ -0.02
CSDC2-201ENST00000306149 RGMBQ6NW40 437 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 IL27RAQ6UWB1 636 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 SFRP1Q8N474 314 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 METTL6Q8TCB7 284 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 DNAAF2Q9NVR5 837 aaKnown RBP14.94□□□□□ -0.02
CSDC2-201ENST00000306149 LEF1Q9UJU2 399 aaPredicted RBP14.94□□□□□ -0.02
CSDC2-201ENST00000306149 DNMT3LQ9UJW3 386 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 ANAPC2Q9UJX6 822 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 RIMKLBQ9ULI2 386 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 FADS3Q9Y5Q0 445 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 MAGED1Q9Y5V3 778 aaPredicted RBP14.94□□□□□ -0.02
CSDC2-201ENST00000306149 STX16O14662 325 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 MLYCDO95822 493 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 GUCA1CO95843 209 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 ALDH2P05091 517 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 ZDHHC11BP0C7U3 371 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 G6PDP11413 515 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 CTPS1P17812 591 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 STT3AP46977 705 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 ACLYP53396 1101 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 ERVK-8P63133 956 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 FAM189BP81408 668 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 KLHL35Q6PF15 583 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 PAPD5Q8NDF8 572 aaKnown RBP14.94□□□□□ -0.02
CSDC2-201ENST00000306149 ZNF420Q8TAQ5 688 aaPredicted RBP14.94□□□□□ -0.02
CSDC2-201ENST00000306149 C12orf43Q96C57 262 aaKnown RBP14.94□□□□□ -0.02
CSDC2-201ENST00000306149 FAM210AQ96ND0 272 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 NPLQ9BXD5 320 aaPredicted RBP14.94□□□□□ -0.02
CSDC2-201ENST00000306149 HIPK3Q9H422 1215 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 PLGRKTQ9HBL7 147 aa14.94□□□□□ -0.02
CSDC2-201ENST00000306149 MKI67P46013 3256 aaKnown RBP14.94□□□□□ -0.02
CSDC2-201ENST00000306149 KLK8O60259 260 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 RSL1D1O76021 490 aaKnown RBP14.93□□□□□ -0.02
CSDC2-201ENST00000306149 VARSP26640 1264 aaKnown RBP14.93□□□□□ -0.02
CSDC2-201ENST00000306149 TTKP33981 857 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 SLC11A2P49281 568 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 CDH4P55283 916 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 ATP6AP1LQ52LC2 224 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 TMEM214Q6NUQ4 689 aaKnown RBP14.93□□□□□ -0.02
CSDC2-201ENST00000306149 FUT10Q6P4F1 479 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 SAPCD2Q86UD0 394 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 OR6K2Q8NGY2 324 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 DOK1Q99704 481 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 BRINP2Q9C0B6 783 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 TET1Q8NFU7 2136 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.93□□□□□ -0.02
CSDC2-201ENST00000306149 TMEM88BA6NKF7 163 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 F11P03951 625 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 CORO1AP31146 461 aaKnown RBP14.93□□□□□ -0.02
CSDC2-201ENST00000306149 CA5AP35218 305 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 TTPAP49638 278 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 ZNF177Q13360 481 aaPredicted RBP14.93□□□□□ -0.02
CSDC2-201ENST00000306149 ABRAXAS1Q6UWZ7 409 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 LRRC43Q8N309 656 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 TERB1Q8NA31 727 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 EID2BQ96D98 161 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 CHID1Q9BWS9 393 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.93□□□□□ -0.02
CSDC2-201ENST00000306149 RHBDL2Q9NX52 303 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 FAF1Q9UNN5 650 aaPredicted RBP14.93□□□□□ -0.02
CSDC2-201ENST00000306149 PCDHB9Q9Y5E1 797 aa14.93□□□□□ -0.02
CSDC2-201ENST00000306149 GOLGA8CPA6NN73 597 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 COCHO43405 550 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 ALPIP09923 528 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 GGT5P36269 586 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 CAPGP40121 348 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 GRIK2Q13002 908 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 TMED1Q13445 227 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 RFTN2Q52LD8 501 aaPredicted RBP14.92□□□□□ -0.02
CSDC2-201ENST00000306149 CYBRD1Q53TN4 286 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 ATXN7L2Q5T6C5 722 aaPredicted RBP14.92□□□□□ -0.02
CSDC2-201ENST00000306149 GLYATQ6IB77 296 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 SPATA17Q96L03 361 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 NUSAP1Q9BXS6 441 aaKnown RBP14.92□□□□□ -0.02
CSDC2-201ENST00000306149 ACTL8Q9H568 366 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 SMPD4Q9NXE4 827 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 SMPD3Q9NY59 655 aaPredicted RBP14.92□□□□□ -0.02
CSDC2-201ENST00000306149 SH3PXD2BA1X283 911 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 MOXD2PA6NHM9 499 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 B4GAT1O43505 415 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 CD160O95971 181 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 UMPSP11172 480 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 DCKP27707 260 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 GDF5P43026 501 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 RPS9P46781 194 aaKnown RBP14.92□□□□□ -0.02
CSDC2-201ENST00000306149 ARF5P84085 180 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 PRKG2Q13237 762 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 ABRAXAS2Q15018 415 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 NR6A1Q15406 480 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 TXNDC11Q6PKC3 985 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 PATL1Q86TB9 770 aaKnown RBP14.92□□□□□ -0.02
CSDC2-201ENST00000306149 DHRSXQ8N5I4 330 aa14.92□□□□□ -0.02
CSDC2-201ENST00000306149 PCSK9Q8NBP7 692 aaKnown RBP14.92□□□□□ -0.02
CSDC2-201ENST00000306149 OR4F6Q8NGB9 312 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms