RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 XKR4Q5GH76 650 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 CRELD2Q6UXH1 353 aaPredicted RBP13.28□□□□□ -0.28
TRIM56-201ENST00000306085 ZNF720Q7Z2F6 126 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 EIF5A2Q9GZV4 153 aaKnown RBP13.28□□□□□ -0.28
TRIM56-201ENST00000306085 FARS2O95363 451 aaKnown RBP13.28□□□□□ -0.28
TRIM56-201ENST00000306085 DSG2Q14126 1118 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 PTPRNQ16849 979 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 WASHC1A8K0Z3 465 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 WASH3PC4AMC7 463 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 WASH2PQ6VEQ5 465 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 E7EQ34 232 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 FGF10O15520 208 aaPredicted RBP13.27□□□□□ -0.28
TRIM56-201ENST00000306085 ITGA5P08648 1049 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 CYP11B2P19099 503 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 RBL1P28749 1068 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 MAGEA3P43357 314 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 PAQR7Q86WK9 346 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 ZNF101Q8IZC7 436 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 SMURF2Q9HAU4 748 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 PRPF19Q9UMS4 504 aaKnown RBP13.27□□□□□ -0.28
TRIM56-201ENST00000306085 SMPD3Q9NY59 655 aaPredicted RBP13.27□□□□□ -0.28
TRIM56-201ENST00000306085 KCNE2Q9Y6J6 123 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 C22orf31O95567 290 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 RARAP10276 462 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 ZDHHC17Q8IUH5 632 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 PSTKQ8IV42 348 aaKnown RBP13.27□□□□□ -0.28
TRIM56-201ENST00000306085 MFSD14AQ96MC6 490 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 NODALQ96S42 347 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 BRWD1Q9NSI6 2320 aa13.27□□□□□ -0.28
TRIM56-201ENST00000306085 CLCA1A8K7I4 914 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 HJURPQ8NCD3 748 aaPredicted RBP13.27□□□□□ -0.29
TRIM56-201ENST00000306085 TAPBPLQ9BX59 468 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 TMPRSS4Q9NRS4 437 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 HACL1Q9UJ83 578 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 PDE2AO00408 941 aaPredicted RBP13.27□□□□□ -0.29
TRIM56-201ENST00000306085 IFNW1P05000 195 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 ATXN7L3Q14CW9 347 aaPredicted RBP13.27□□□□□ -0.29
TRIM56-201ENST00000306085 DLG2Q15700 870 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 C3orf33Q6P1S2 294 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 C17orf64Q86WR6 236 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 KCNS2Q9ULS6 477 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 RABL2BQ9UNT1 228 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 FFAR2O15552 330 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 SOX10P56693 466 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 UBXN11Q5T124 520 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 POGLUT1Q8NBL1 392 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 MSANTD3Q96H12 275 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 NECAB3Q96P71 396 aaPredicted RBP13.27□□□□□ -0.29
TRIM56-201ENST00000306085 FBRSQ9HAH7 460 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 REREQ9P2R6 1566 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 LYPLA1O75608 230 aaPredicted RBP13.27□□□□□ -0.29
TRIM56-201ENST00000306085 MIPP30301 263 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 IL1RAPQ9NPH3 570 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 IGFBP4P22692 258 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 LCN1P31025 176 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 FMO3P31513 532 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 HSPB3Q12988 150 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 TATDN2Q93075 761 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 TBCBQ99426 244 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 KANSL3Q9P2N6 904 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 ATP7AQ04656 1500 aa13.27□□□□□ -0.29
TRIM56-201ENST00000306085 A0A0A0MRY4 1105 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 DAPL1A0PJW8 107 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 PGLSO95336 258 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 ELFN1P0C7U0 828 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 HK1P19367 917 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 ZNF517Q6ZMY9 492 aaPredicted RBP13.26□□□□□ -0.29
TRIM56-201ENST00000306085 ARCQ7LC44 396 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 ZNF431Q8TF32 576 aaPredicted RBP13.26□□□□□ -0.29
TRIM56-201ENST00000306085 SPATA13Q96N96 652 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 OR12D3Q9UGF7 316 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 RAP2CQ9Y3L5 183 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 GJB6O95452 261 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 RYKP34925 604 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 CDH12P55289 794 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 HERC3Q15034 1050 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 SSX2Q16385 188 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 TAAR1Q96RJ0 339 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 ELOVL4Q9GZR5 314 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 YES1P07947 543 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 CFL1P23528 166 aaKnown RBP13.26□□□□□ -0.29
TRIM56-201ENST00000306085 MINDY4Q4G0A6 757 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 EMID1Q96A84 441 aaPredicted RBP13.26□□□□□ -0.29
TRIM56-201ENST00000306085 OR5B12Q96R08 314 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 C7orf50Q9BRJ6 194 aaKnown RBP13.26□□□□□ -0.29
TRIM56-201ENST00000306085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRIM56-201ENST00000306085 TEX13DA0A0J9YY54 714 aaPredicted RBP13.26□□□□□ -0.29
TRIM56-201ENST00000306085 PABPC1LQ4VXU2 614 aaKnown RBP13.26□□□□□ -0.29
TRIM56-201ENST00000306085 XRRA1Q6P2D8 792 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 IGDCC4Q8TDY8 1250 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 CDH19Q9H159 772 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 NELFAQ9H3P2 528 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 TBL1XO60907 577 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 ADAM15Q13444 863 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 TIGD4Q8IY51 512 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 SLC37A3Q8NCC5 494 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 GLS2Q9UI32 602 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 METP08581 1390 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 ISPDA4D126 451 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 hCG_2039718K7EN88 272 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms