RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 CHKAP35790 457 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 ITGA7Q13683 1181 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 COX18Q8N8Q8 333 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 PRDM16Q9HAZ2 1276 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 RC3H2Q9HBD1 1191 aaKnown RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 TUBG2Q9NRH3 451 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 TRPS1Q9UHF7 1281 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 ITGB1BP2Q9UKP3 347 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 C15orf41Q9Y2V0 281 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 CPSF1Q10570 1443 aaKnown RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 REM1O75628 298 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 CPNE6O95741 557 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 GNRHRP30968 328 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 RBM34P42696 430 aaKnown RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 DUSP4Q13115 394 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 PCBP2Q15366 365 aaKnown RBP eCLIP14.1□□□□□ -0.154e-27■■■■■ 105
HIPK3-201ENST00000303296 CRTC2Q53ET0 693 aaPredicted RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 USP30Q70CQ3 517 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 HID1Q8IV36 788 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 ZNF557Q8N988 423 aaPredicted RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 RFKQ969G6 155 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 OR10A4Q9H209 315 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 BCAS3Q9H6U6 928 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 TLE6Q9H808 572 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 KELP23276 732 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 ACSL1P33121 698 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 RAB10P61026 200 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 ASB18Q6ZVZ8 466 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 RANBP3LQ86VV4 465 aaPredicted RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 SLC9A9Q8IVB4 645 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 HELQQ8TDG4 1101 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 KLHL6Q8WZ60 621 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 HDAC2Q92769 488 aaKnown RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 HDAC10Q969S8 669 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 EMC3Q9P0I2 261 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 AP4B1Q9Y6B7 739 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 USP42Q9H9J4 1324 aaKnown RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 UBXN7O94888 489 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 SLC6A3Q01959 620 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 TROAPQ12815 778 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 DPYSL3Q14195 570 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 NET1Q7Z628 596 aaPredicted RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 DNAJB7Q7Z6W7 309 aaPredicted RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 ZDHHC17Q8IUH5 632 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 CPA6Q8N4T0 437 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 AUTS2Q8WXX7 1259 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 GMEB2Q9UKD1 530 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 NOP16Q9Y3C1 178 aaKnown RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 MFHAS1Q9Y4C4 1052 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 SLC22A3O75751 556 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 LPOP22079 712 aaPredicted RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 MAPK12P53778 367 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 CARD16Q5EG05 197 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 GALNT13Q8IUC8 556 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 SPPL2CQ8IUH8 684 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 UNC5BQ8IZJ1 945 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 ZNF606Q8WXB4 792 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 VAT1Q99536 393 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.1□□□□□ -0.151e-7■■□□□ 14.2
HIPK3-201ENST00000303296 CYTH4Q9UIA0 394 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 HHLA1C9JL84 531 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 NME6O75414 186 aaPredicted RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 BANF1O75531 89 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 RECQL4O94761 1208 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 PARP6Q2NL67 630 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 PLEKHG4Q58EX7 1191 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 PRAMEF19Q5SWL8 479 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 CAPN13Q6MZZ7 669 aaPredicted RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 PROKR2Q8NFJ6 384 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 NSMCE3Q96MG7 304 aa14.1□□□□□ -0.15
HIPK3-201ENST00000303296 TREX2Q9BQ50 279 aaPredicted RBP14.1□□□□□ -0.15
HIPK3-201ENST00000303296 A0A1B0GV50 99 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 FABP12A6NFH5 140 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 ENPP3O14638 875 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 MUSKO15146 869 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 SLC31A1O15431 190 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 SELENOVP59797 346 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 HERV-K104P61576 105 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 EGFLAMQ63HQ2 1017 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 SLC30A10Q6XR72 485 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 CHST9Q7L1S5 443 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 TOR1AIP2Q8NFQ8 470 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 RADILQ96JH8 1075 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 NYAP2Q9P242 653 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.09□□□□□ -0.15
HIPK3-201ENST00000303296 TEX13DA0A0J9YY54 714 aaPredicted RBP14.09□□□□□ -0.15
HIPK3-201ENST00000303296 DLG2Q15700 870 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 TCEANCQ8N8B7 351 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 BAP1Q92560 729 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 ZDHHC15Q96MV8 337 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 MTMR9Q96QG7 549 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 AGO4Q9HCK5 861 aaKnown RBP14.09□□□□□ -0.15
HIPK3-201ENST00000303296 A0A1W2PQ67 120 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 SAP18O00422 153 aaKnown RBP14.09□□□□□ -0.15
HIPK3-201ENST00000303296 AXIN1O15169 862 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 FSBPO95073 299 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 ADRA1DP25100 572 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 S100PP25815 95 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 ADORA2AP29274 412 aa14.09□□□□□ -0.15
HIPK3-201ENST00000303296 RNASEH2BQ5TBB1 312 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms