RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ACOT9Q9Y305 439 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 TMEM191CA6NGB0 347 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 USP17L5A8MUK1 530 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 GLAP06280 429 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 APRTP07741 180 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 SNRPB2P08579 225 aaKnown RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 HSMCR30P0CW71 290 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 ARSAP15289 507 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 CRKP46108 304 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 BRCC3P46736 316 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 CAPZA2P47755 286 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 NOVP48745 357 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 CCT3P49368 545 aaKnown RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 CLK2P49760 499 aaKnown RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 OGDHQ02218 1023 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 ABRQ12979 859 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 FADDQ13158 208 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 DAG1Q14118 895 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 FASTKQ14296 549 aaKnown RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 GRK1Q15835 563 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 SMTNL2Q2TAL5 461 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 TUSC1Q2TAM9 212 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 DARS2Q6PI48 645 aaKnown RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 TFAP2EQ6VUC0 442 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 CMC1Q7Z7K0 106 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 SCUBE3Q8IX30 993 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 PELI3Q8N2H9 469 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 AMER2Q8N7J2 671 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 ACOX2Q99424 681 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 SLC30A3Q99726 388 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 EBNA1BP2Q99848 306 aaKnown RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 CCDC32Q9BV29 185 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 FRMD8P1Q9BZ68 369 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 COA4Q9NYJ1 87 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 VTI1BQ9UEU0 232 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 TSR3Q9UJK0 312 aaKnown RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 MKL2Q9ULH7 1088 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 PLIN4Q96Q06 1357 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 PNMA8CA0A1B0GUJ8 204 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 RAB19A4D1S5 217 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 CLDN24A6NM45 220 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 DFFAO00273 331 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 ARPC2O15144 300 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 AHSGP02765 367 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 ALPPP05187 535 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 FCER2P06734 321 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 SRCP12931 536 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 TGFBR2P37173 567 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 ETV6P41212 452 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 MASP1P48740 699 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 EIF6P56537 245 aaKnown RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 SSTP61278 116 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 CNTN2Q02246 1040 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 RNF180Q86T96 592 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 TSPYL5Q86VY4 417 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 METTL23Q86XA0 190 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 ANKRD52Q8NB46 1076 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 BLOC1S5Q8TDH9 187 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 CBWD1Q9BRT8 395 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 NAT9Q9BTE0 207 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 MLPHQ9BV36 600 aaPredicted RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 HPF1Q9NWY4 346 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 MTMR10Q9NXD2 777 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 TRHDEQ9UKU6 1024 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 ACAD8Q9UKU7 415 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 DTX4Q9Y2E6 619 aa9.12□□□□□ -0.95
PDGFC-201ENST00000274071 PCDHGA9Q9Y5G4 932 aaKnown RBP9.12□□□□□ -0.95
PDGFC-201ENST00000274071 SLX4Q8IY92 1834 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 CLRN2A0PK11 232 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 PIPSLA2A3N6 862 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 KPNA7A9QM74 516 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 TMEM233B4DJY2 109 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 AGRPO00253 132 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 STX7O15400 261 aaKnown RBP9.11□□□□□ -0.95
PDGFC-201ENST00000274071 SNAPINO95295 136 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 CDK1P06493 297 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 RRASP10301 218 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 MYL9P24844 172 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 GRIA4P48058 902 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 PRKAA1Q13131 559 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 PDSS1Q5T2R2 415 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 STRIP1Q5VSL9 837 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 C1orf186Q6ZWK4 172 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 CCDC190Q86UF4 302 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 STK32CQ86UX6 486 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 ZNF565Q8N9K5 539 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 PAPD5Q8NDF8 572 aaKnown RBP9.11□□□□□ -0.95
PDGFC-201ENST00000274071 SLC9A6Q92581 669 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 TTPALQ9BTX7 342 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 MS4A7Q9GZW8 240 aaPredicted RBP9.11□□□□□ -0.95
PDGFC-201ENST00000274071 ABCG4Q9H172 646 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 ZCCHC4Q9H5U6 513 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 ASB7Q9H672 318 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 RIOX1Q9H6W3 641 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 IL1RL2Q9HB29 575 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 OXSMQ9NWU1 459 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 ING3Q9NXR8 418 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 RGS17Q9UGC6 210 aaPredicted RBP9.11□□□□□ -0.95
PDGFC-201ENST00000274071 SEPT9Q9UHD8 586 aaPredicted RBP9.11□□□□□ -0.95
PDGFC-201ENST00000274071 RAPGEFL1Q9UHV5 662 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms