RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 USP53Q70EK8 1073 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 TAF8Q7Z7C8 310 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 PHLDB2Q86SQ0 1253 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 SRLQ86TD4 932 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 ZC3H18Q86VM9 953 aaKnown RBP9.66□□□□□ -0.86
LRTM1-201ENST00000273286 CAMK1DQ8IU85 385 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 Q8N1Y9 231 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 PDXPQ96GD0 296 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 ZNF599Q96NL3 588 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 PSKH2Q96QS6 385 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 ERGIC2Q96RQ1 377 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 PCDHB18PQ96TA0 734 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 AGPAT1Q99943 283 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 KLC2Q9H0B6 622 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 CLMPQ9H6B4 373 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 WDR26Q9H7D7 661 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 PCDH18Q9HCL0 1135 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 PARVAQ9NVD7 372 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 MYO6Q9UM54 1294 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 DUSP10Q9Y6W6 482 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 LRP4O75096 1905 aa9.66□□□□□ -0.86
LRTM1-201ENST00000273286 LGALS16A8MUM7 142 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 EEF2KO00418 725 aaKnown RBP9.65□□□□□ -0.86
LRTM1-201ENST00000273286 HGSO14964 777 aaPredicted RBP9.65□□□□□ -0.86
LRTM1-201ENST00000273286 EPHB6O15197 1021 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 INSIG1O15503 277 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 SOCS5O75159 536 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 CPNE6O95741 557 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 SCG5P05408 212 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 ATP1A3P13637 1013 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 THBS2P35442 1172 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 HCAR3P49019 387 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 RPL7AP62424 266 aaKnown RBP9.65□□□□□ -0.86
LRTM1-201ENST00000273286 CCL7P80098 99 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 MYL5Q02045 173 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 ZFP36L1Q07352 338 aaKnown RBP9.65□□□□□ -0.86
LRTM1-201ENST00000273286 SF1Q15637 639 aaKnown RBP9.65□□□□□ -0.86
LRTM1-201ENST00000273286 FXNQ16595 210 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 ERMARDQ5T6L9 678 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 AFMIDQ63HM1 303 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 ACAD10Q6JQN1 1059 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 DPPA4Q7L190 304 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 SPRED1Q7Z699 444 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 PIM3Q86V86 326 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 PPIL6Q8IXY8 311 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 MCOLN2Q8IZK6 566 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 BBS5Q8N3I7 341 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 FAM46DQ8NEK8 389 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 ADAMTS17Q8TE56 1095 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 SGF29Q96ES7 293 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 MAGEB5Q9BZ81 275 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 DPEP2Q9H4A9 486 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 LRIT1Q9P2V4 623 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 LIMA1Q9UHB6 759 aaKnown RBP9.65□□□□□ -0.86
LRTM1-201ENST00000273286 FBXL7Q9UJT9 491 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 COQ6Q9Y2Z9 468 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 LOXL2Q9Y4K0 774 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 HEMK1Q9Y5R4 338 aaPredicted RBP9.65□□□□□ -0.86
LRTM1-201ENST00000273286 MYO18BQ8IUG5 2567 aa9.65□□□□□ -0.86
LRTM1-201ENST00000273286 PRSS38A1L453 326 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 J3KR12 359 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 PSMD11O00231 422 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 SLC28A2O43868 658 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 PRPSAP2O60256 369 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 CPP00450 1065 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 MYCLP1P12525 358 aaPredicted RBP9.65□□□□□ -0.87
LRTM1-201ENST00000273286 KRT10P13645 584 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 TEAD1P28347 426 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 KLK7P49862 253 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 PAPOLAP51003 745 aaKnown RBP9.65□□□□□ -0.87
LRTM1-201ENST00000273286 COPB1P53618 953 aaKnown RBP9.65□□□□□ -0.87
LRTM1-201ENST00000273286 UBXN1Q04323 297 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 ILF3Q12906 894 aaKnown RBP eCLIP9.65□□□□□ -0.87
LRTM1-201ENST00000273286 TRA2AQ13595 282 aaKnown RBP eCLIP9.65□□□□□ -0.87
LRTM1-201ENST00000273286 HLTFQ14527 1009 aaKnown RBP eCLIP9.65□□□□□ -0.87
LRTM1-201ENST00000273286 NR1D2Q14995 579 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 SPATS1Q496A3 300 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 MANEAQ5SRI9 462 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 KIAA1614Q5VZ46 1190 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 RFX8Q6ZV50 586 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 CCDC112Q8NEF3 446 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 FUBP1Q96AE4 644 aaKnown RBP9.65□□□□□ -0.87
LRTM1-201ENST00000273286 SEMA3CQ99985 751 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 DPYSL5Q9BPU6 564 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 GSDMCQ9BYG8 508 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 KRTAP4-5Q9BYR2 181 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 SEMA4CQ9C0C4 833 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 SLC39A8Q9C0K1 460 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 DHX35Q9H5Z1 703 aaKnown RBP9.65□□□□□ -0.87
LRTM1-201ENST00000273286 ZWILCHQ9H900 591 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 FGF22Q9HCT0 170 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 PHPT1Q9NRX4 125 aaPredicted RBP9.65□□□□□ -0.87
LRTM1-201ENST00000273286 ANO10Q9NW15 660 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 FANCLQ9NW38 375 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 TRNAU1APQ9NX07 287 aaKnown RBP9.65□□□□□ -0.87
LRTM1-201ENST00000273286 PISDQ9UG56 409 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 COA3Q9Y2R0 106 aaPredicted RBP9.65□□□□□ -0.87
LRTM1-201ENST00000273286 X6R8D5 127 aa9.65□□□□□ -0.87
LRTM1-201ENST00000273286 LRRK1Q38SD2 2015 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 TMEM202A6NGA9 273 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms