RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 CEP41Q9BYV8 373 aa13.93□□□□□ -0.18
COMMD4-201ENST00000267935 ACTL8Q9H568 366 aa13.93□□□□□ -0.18
COMMD4-201ENST00000267935 ACSS2Q9NR19 701 aa13.93□□□□□ -0.18
COMMD4-201ENST00000267935 DDX56Q9NY93 547 aaKnown RBP13.93□□□□□ -0.18
COMMD4-201ENST00000267935 SEMA5BQ9P283 1151 aa13.93□□□□□ -0.18
COMMD4-201ENST00000267935 FAM153AQ9UHL3 310 aa13.93□□□□□ -0.18
COMMD4-201ENST00000267935 FARSAQ9Y285 508 aaKnown RBP13.93□□□□□ -0.18
COMMD4-201ENST00000267935 COL12A1Q99715 3063 aa13.93□□□□□ -0.18
COMMD4-201ENST00000267935 BLACEA4D250 179 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 KLHL33A6NCF5 533 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 AGFG2O95081 481 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 FURINP09958 794 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 NR1D1P20393 614 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 VARSP26640 1264 aaKnown RBP13.92□□□□□ -0.18
COMMD4-201ENST00000267935 PBX1P40424 430 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 HSD11B2P80365 405 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 DMPKQ09013 629 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 XRCC4Q13426 336 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 ITGA9Q13797 1035 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 RPE65Q16518 533 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 SLC18A3Q16572 532 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 UGT8Q16880 541 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 LONRF2Q1L5Z9 754 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 DNTTIP2Q5QJE6 756 aaKnown RBP13.92□□□□□ -0.18
COMMD4-201ENST00000267935 PWWP2BQ6NUJ5 590 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 CAVIN1Q6NZI2 390 aaKnown RBP13.92□□□□□ -0.18
COMMD4-201ENST00000267935 TMEM220Q6QAJ8 160 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 GALNT11Q8NCW6 608 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 TADA1Q96BN2 335 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 RNF31Q96EP0 1072 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 TEKT5Q96M29 485 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 FGF21Q9NSA1 209 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 KCND1Q9NSA2 647 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 HRASLS2Q9NWW9 162 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 PKP3Q9Y446 797 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 COLEC10Q9Y6Z7 277 aa13.92□□□□□ -0.18
COMMD4-201ENST00000267935 RP1L1Q8IWN7 2480 aaPredicted RBP13.91□□□□□ -0.18
COMMD4-201ENST00000267935 IGHV5-51A0A0C4DH38 117 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 TLCD2A6NGC4 264 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 AKR1B10O60218 316 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 CPNE3O75131 537 aaKnown RBP13.91□□□□□ -0.18
COMMD4-201ENST00000267935 MT-CYBP00156 380 aaPredicted RBP13.91□□□□□ -0.18
COMMD4-201ENST00000267935 TMEM253P0C7T8 217 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 PYGMP11217 842 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 FOLR1P15328 257 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 MSH3P20585 1137 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 SPAM1P38567 509 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 CCL11P51671 97 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 TUBB4BP68371 445 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 TUBB2AQ13885 445 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 TFDP2Q14188 446 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 KRT33BQ14525 404 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 LRRC38Q5VT99 294 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 OOSP2Q86WS3 158 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 CPNE8Q86YQ8 564 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 TMEM126BQ8IUX1 230 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 CARFQ8N187 725 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 SPATA22Q8NHS9 363 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 SLC35G2Q8TBE7 412 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 CPT1CQ8TCG5 803 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 TFB1MQ8WVM0 346 aaKnown RBP13.91□□□□□ -0.18
COMMD4-201ENST00000267935 MR1Q95460 341 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 MAP3K3Q99759 626 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 TUBB2BQ9BVA1 445 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 IL26Q9NPH9 171 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 ACSL5Q9ULC5 683 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 WDR37Q9Y2I8 494 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 PCDHGB7Q9Y5F8 929 aa13.91□□□□□ -0.18
COMMD4-201ENST00000267935 PCDHGA9Q9Y5G4 932 aaKnown RBP13.91□□□□□ -0.18
COMMD4-201ENST00000267935 GLYATL1P3A0A0U1RQE8 302 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 LOC285095A0A1B0GVY8 99 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 K7EM74 188 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 AURKAO14965 403 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 SCRG1O75711 98 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 ZBTB11O95625 1053 aaPredicted RBP13.9□□□□□ -0.18
COMMD4-201ENST00000267935 KRT1P04264 644 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 TPM1P09493 284 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 HNRNPH3P31942 346 aaKnown RBP13.9□□□□□ -0.18
COMMD4-201ENST00000267935 SLC1A1P43005 524 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 WNT3AP56704 352 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 GSDMDP57764 484 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 PRKAA1Q13131 559 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 GSE1Q14687 1217 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 CHRNA6Q15825 494 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 KHDC1Q4VXA5 237 aaKnown RBP13.9□□□□□ -0.18
COMMD4-201ENST00000267935 METRNLQ641Q3 311 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 C11orf96Q7Z7L8 435 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 TMEM135Q86UB9 458 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 HPS6Q86YV9 775 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 RHOT2Q8IXI1 618 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 RHOT1Q8IXI2 618 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 D2HGDHQ8N465 521 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 RASGEF1AQ8N9B8 481 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 OR8K1Q8NGG5 319 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 RNF25Q96BH1 459 aaPredicted RBP13.9□□□□□ -0.18
COMMD4-201ENST00000267935 OLFM3Q96PB7 478 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 VAT1Q99536 393 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 FANCEQ9HB96 536 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 SYTL2Q9HCH5 934 aa13.9□□□□□ -0.18
COMMD4-201ENST00000267935 IMP3Q9NV31 184 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms